Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1721 ATGAGGAGAAACTGCAACTTGGAACTTGCCCTTTTCCCTCCCTCCGATTCTGGCCCTCTCCACCACCACAGGGTCCAAGAAGGTACTCAGATCAGTCCATTCCATCACCACCACCGCCAGGAACACCAACAACCACTCACAATTTTCTACGATGGCAAGATTTGTGTTGCGGATGTCACAGAGCTTCAGGCGAAATCTATTTTGATGCTTGCAAATGGAAAATTAGAAGAAAGAGATCGATCAGAGGGATGTTCAGCAACAGTTATGCAATCTCCTCACCAATTGTACAGTCCTGGCACTTCCCTTTCCATGAGAAAATCGTTGCAACGCTTCCTTATCAAGAGAAAGAATCGGGTCCAAGAAGCATTGCCGTACCATCACTAG 384 0.4688 MRRNCNLELALFPPSDSGPLHHHRVQEGTQISPFHHHHRQEHQQPLTIFYDGKICVADVTELQAKSILMLANGKLEERDRSEGCSATVMQSPHQLYSPGTSLSMRKSLQRFLIKRKNRVQEALPYHH* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1721 127 ProSiteProfiles Tify domain profile. 39 73 IPR010399 -
Pvu6g1721 127 Pfam tify domain 42 72 IPR010399 -
Pvu6g1721 127 SMART tify_2 39 73 IPR010399 -
Pvu6g1721 127 PANTHER - 1 127 - -
Pvu6g1721 127 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 127 IPR040390 -
Pvu6g1721 127 Pfam Jas motif 105 125 IPR018467 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1721 1 126 Tify Gene Family AT1G30135 41.085 2.85e-21 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pvu6g1721 tify 1.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1721 - - gmx:100500349 194.126