Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1706 ATGTCGCTTTCCTGTGCCAAAAACTTCTTCCAGAGGTTCTGGCTAGATGAATTCCAAATGGGTAATATTTCCCAAGGAAGCTTTTTGGCCAATGATGATCTCCTGCCATCTCTTGGAGCCAGAATTAACCAGGAATTTAGACTTAGAAGATACGTAATCTCCCCTTTCAATCCACGCTACAGGGCCTGGGAGTTGGTACTGGTTGTTCTAGTCATATACTCAGCTTGGATTTGCCCATTTGAGTTTGCCTTTCTGCCTTACAAGGAAGATACTCTATTCATCATAGACAACATTGTCAATGGCTTCTTTGCAATTGACATAGTGTTGACATTCTTTGTTGCATACCTTGATCACCATTCTTATCTTCTCGTTGATGATCCAAAGAGGATTGCAATCAGGTACCTATCCTCCTGGTTTGCTTTTGATGTCTGCTCAACAATACCGTTTCAATCCTTCAGCTTCCTCCTAACCAATCATATCAATGAACTTGGCTTCAAAGTTTTTAACATGTTTCGGTTATGGCGTTTGAGACGAGTCAGTTCTCTGTTTGCAAGACTTGAAAAGGACATTCGCTTCAATTATTTCTGGACTAGATGCACAAAGCTCATTGCTGTGACCTTGTTTGCTGTGCACTGTGCGGGATGCTTTAACTATCTCATTGCAGATAGGTACCCAGATTCCAAAAGAACCTGGATTGGTGCAGTGTACCCAAATTTCAAAGAAGAAAGTCTTTGGGAAAGATATGTCACTGCAATATACTGGTCCATTGTCACTCTTACCACCACCGGCTATGGGGATTTACATGCTGAGAACACAAGAGAAATGCTGTTTGATATCGCTTACATGCTGTTCAACTTGGGTTTAACATCGTACATCATTGGCAACATGACCAACCTTGTAGTCCACTGGACCAGCCGTACCAGAAATTTTAGAGACACAGTCAAAGCAGCTTCTGAATTTGCATCAAGAAACCATTTGCCCCATCGCATACAAGATCAGATGTTGTCACATATATGTTTGAGGTTTAAAACAGAAGGACTGAAGCAGCAAGAAACATTGAATGATCTTCCAAAGGCAATTCGTTCAAGCATTGCACACCATCTGTTTTTTCCTGTCGTGCAAAAGGTCTACCTCTTCCAAGGAGTCTCACATGATTTCCTTTTCCAGCTGATTTCAGATATGGAGGCTGAATATTTCCCACCCAAGGAAGATGTGATACTACAAAACGAGTCTTCCACAGAACTTTATGTGCTGGTTTCAGGGGCAGTGGATCTGGTTCGCTACATCGATGGGCGTGATCATGTTCATGGGAAAGCAGTTGCAGTAGATGCGTGTGGAGAGATTGGAGTTTTATATCATATAGCCCAGCCTTTTACCGTTAGGACCACAGAACTTTCTCAGATTTTAAGACTCAACAAAACATCCTTAATGAATGTTTTACAAGCAAATCCAGGAGACGCACAAATTGTAATGGATAACCTTTTAATGAGGTTGAAGGGACGTGAAGATTTTGGCTTTGAATATCCATGCACAGATTCTGGGCGGTTTCCAAATGAACTGCTTCAAGGAGGTCACACGATAGGAAGCTCTTCTCACGAGTGTACAAATAATTCACATGAGCATTCATTAATGCATGAAGGAGAGTGCATAGATCTTAGAAAAACTGAGACCAGTTTGCGTAAGATGACTAATGATGATCATTTAGTCACTAAACATAGCATGATCCCCGAGCATGATGCAACCCCTGCACGCAAAGGGAATCTAGATATTGTTGAAATTCTGCTGGAAAGAAACTCAAATCCTAACCCAAATTCCATAGGGTGGACACAAAATGCTCTAGCAAAACAGCCGAAAAACAAGAGCATTTGTGGCAAAAAAAGGAGTCAAGAAAACGAGAAGTTGGATGAATTTAGAATAGAGATAGAGCCAGAAATCCGCCTTGACAGGGGTAGCTCAATGAGAAACAGAAGACATGATGGTATTAGATCTATCAAGTACCAAAAAGAAAAAATAAGCACAAACTCCAATTCAAGACATTCTAACTGTACAAGTGATATCGAATCGGCAAGGCTCCCCAAGAAGAGAGTAACAATCCAGCTGCTAAATGGATGCAGGAGTACCTCACAGGGAAGGCACGGAAAATTAATAATCCTGCCCGATTCGTTGGAAGAGCTGCTCAAAATTGCCGGTGAAAAATTTGGCGGCTTCAACCCTATAAAAGTAGTAAATACAGAGGATGCAGAGATAGATGACATAAATGTCATCCGAGATGGAGATCGTCTCTTTCTTGTGGGCTGCGATAACGAAAATTTGTGTTCATGA 2322 0.4143 MSLSCAKNFFQRFWLDEFQMGNISQGSFLANDDLLPSLGARINQEFRLRRYVISPFNPRYRAWELVLVVLVIYSAWICPFEFAFLPYKEDTLFIIDNIVNGFFAIDIVLTFFVAYLDHHSYLLVDDPKRIAIRYLSSWFAFDVCSTIPFQSFSFLLTNHINELGFKVFNMFRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADRYPDSKRTWIGAVYPNFKEESLWERYVTAIYWSIVTLTTTGYGDLHAENTREMLFDIAYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVKAASEFASRNHLPHRIQDQMLSHICLRFKTEGLKQQETLNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSHDFLFQLISDMEAEYFPPKEDVILQNESSTELYVLVSGAVDLVRYIDGRDHVHGKAVAVDACGEIGVLYHIAQPFTVRTTELSQILRLNKTSLMNVLQANPGDAQIVMDNLLMRLKGREDFGFEYPCTDSGRFPNELLQGGHTIGSSSHECTNNSHEHSLMHEGECIDLRKTETSLRKMTNDDHLVTKHSMIPEHDATPARKGNLDIVEILLERNSNPNPNSIGWTQNALAKQPKNKSICGKKRSQENEKLDEFRIEIEPEIRLDRGSSMRNRRHDGIRSIKYQKEKISTNSNSRHSNCTSDIESARLPKKRVTIQLLNGCRSTSQGRHGKLIILPDSLEELLKIAGEKFGGFNPIKVVNTEDAEIDDINVIRDGDRLFLVGCDNENLCS* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1706 773 Gene3D Jelly Rolls 371 503 IPR014710 -
Pvu6g1706 773 Gene3D - 61 301 - -
Pvu6g1706 773 PRINTS EAG/ELK/ERG potassium channel family signature 73 80 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu6g1706 773 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu6g1706 773 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu6g1706 773 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu6g1706 773 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu6g1706 773 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu6g1706 773 Pfam KHA, dimerisation domain of potassium ion channel 694 763 IPR021789 -
Pvu6g1706 773 Pfam Cyclic nucleotide-binding domain 398 482 IPR000595 -
Pvu6g1706 773 Gene3D Helix hairpin bin 302 368 - -
Pvu6g1706 773 SUPERFAMILY Voltage-gated potassium channels 55 301 - -
Pvu6g1706 773 CDD CAP_ED 378 491 IPR000595 -
Pvu6g1706 773 Pfam Ion transport protein 61 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu6g1706 773 ProSiteProfiles cAMP/cGMP binding motif profile. 378 497 IPR000595 -
Pvu6g1706 773 SUPERFAMILY cAMP-binding domain-like 305 498 IPR018490 -
Pvu6g1706 773 SMART cnmp_10 378 495 IPR000595 -
Pvu6g1706 773 PANTHER POTASSIUM CHANNEL AKT1 1 773 IPR045319 GO:0005249|GO:0006813
Pvu6g1706 773 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 773 - -
Pvu6g1706 773 ProSiteProfiles KHA domain profile. 695 773 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1706 Pvu-Chr6 27525049 27531948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1706 1 768 Ion Channels AT4G18290 57.568 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1706 K21867 - gmx:100811356 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1706 6 27525049 27531948 Pvu6g1706 6 27525049 27531948 ECH