Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1677 ATGGGGTGTGCGTTTGGGAGAGAGTCTTCGAGGGAGGAGAGGAGAGAGGAAGTGAGAGAGGCAAAAGCTGAGGTGGGTAGAGCAGAGGTTGTTGAGAATGAGAACATTGAGAAAGAGAAGGAGAAGGAGGGTGGAAGAGAAGAGAAGAGGACAAGGGCAAGGGGAGAGAGGAGGCGATCTTCGAAGCCGAAGCCGAATCCGAGGTTGAGCAACCCACCTAACCATGTTCATGGTGAGCAGGTTGCAGCAGGGTGGCCTTCTTGGCTCTCTAAGGTTGCTGGTGAAGCCATCAACGGATTGACGCCTCGGAGAGCTGACACCTTTGAGAAGCTTGATAAGATCGGGCAAGGTACATACAGCAATGTTTACAAAGCTAGGGATTCTTTGACGGGAAAAATTGTTGCCCTAAAGAAGGTCCGTTTTGACAATTTAGAGCCTGAAAGTGTGAAGTTCATGGCCAGGGAGATTTTGATTCTCCGTCGTCTAGATCATCCCAATGTCATCAAACTTGAAGGCTTAGTGACTTCTAGAATGTCGTGCAGTTTATATCTTGTATTTGAATACATGGTGCATGATCTGGCTGGACTTGCCACAAACCCGGCAATTAAGTTCACAGAATCTCAGGTAAAATGTTATATGCATCAGCTATTTTCGGGACTGGAGCACTGTCACAACCGTCATGTCCTGCATCGTGATATAAAGGGGTCAAACCTTCTTATTGATAATGACGGAACACTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTATGATCCTAATCACAAGCACCCTATGACTAGTAGAGTGGTTACATTATGGTATCGACCTCCAGAACTTCTTCTCGGGGCCACTGAATATAGTGTAGGCGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTATTGGCTGGAAAGCCTATTATGCCTGGTCGAACGGAGGTAGAACAACTACACAAGATATTTAAGCTATGCGGTTCTCCTTCTGATGAATATTGGAAGAAATCAAAGTTGCCTCATGCTACCATTTTTAAGCCCCAGCAGTCATACAAGAGAAGTATTGCAGAGACATTTAAAGATTTTCCTCCATCATCCCTGCCACTTATTGACACCCTTCTCTCAATTGATCCAGATGAACGTTTGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAGCCATATGCCTGTGACCCTTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCTAATGTTGATGGTGTCAAGAAATCTCGTCCACGTGAGCGACGGGGAATTCCAGTGCCAGAGGCCAATGCTGAACTGCAAGCAAATATTGATAGACGGCGGCTGATCACCCATGCAAATGCCAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAGCTCTAGGCTATCCACTGGGTTCTTCACATCACATGGATCCAGTTTTTGATCCTCCTGATGTTCCATTTAGTTCCACAAACTTCTCACAACCTAAAGCAAATATCCAAACATGGTCCGGTCCATTGGTAGATTCTTCTAGTGTGGGCGCACCAAGGAGAAAGAAGAAACATGGAAAGTGA 1635 0.4599 MGCAFGRESSREERREEVREAKAEVGRAEVVENENIEKEKEKEGGREEKRTRARGERRRSSKPKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDSLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGTLRIADFGLASFYDPNHKHPMTSRVVTLWYRPPELLLGATEYSVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRSIAETFKDFPPSSLPLIDTLLSIDPDERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANVDGVKKSRPRERRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKANIQTWSGPLVDSSSVGAPRRKKKHGK* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1677 544 PANTHER CYCLIN-DEPENDENT KINASE 1 544 - -
Pvu6g1677 544 Gene3D Phosphorylase Kinase; domain 1 96 190 - -
Pvu6g1677 544 ProSiteProfiles Protein kinase domain profile. 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1677 544 PANTHER CELL DIVISION PROTEIN KINASE 1 544 - -
Pvu6g1677 544 SMART serkin_6 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1677 544 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Pvu6g1677 544 CDD STKc_CDK9_like 108 392 - -
Pvu6g1677 544 MobiDBLite consensus disorder prediction 426 453 - -
Pvu6g1677 544 MobiDBLite consensus disorder prediction 7 54 - -
Pvu6g1677 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Pvu6g1677 544 MobiDBLite consensus disorder prediction 471 544 - -
Pvu6g1677 544 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Pvu6g1677 544 MobiDBLite consensus disorder prediction 507 529 - -
Pvu6g1677 544 Pfam Protein kinase domain 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1677 544 MobiDBLite consensus disorder prediction 1 79 - -
Pvu6g1677 544 Coils Coil 28 48 - -
Pvu6g1677 544 Gene3D Transferase(Phosphotransferase) domain 1 191 431 - -
Pvu6g1677 544 MobiDBLite consensus disorder prediction 426 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1677 Pvu-Chr6 27302676 27307841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1677 103 430 Core Cell Cycle Gene Families AT5G10270 51.163 5.75e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pvu6g1677 Pkinase 3e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1050 3 24616856 24621740 Pvu6g1677 6 27302676 27307841 PCT