Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1668 ATGAACCAGTACCACATCTACGAAGCCATCGGTCGCGGCAGATACTCCACCGTTTACAAAGGCAGGAAGAAGAAGACTATCGAGTATTTCGCCATCAAGAGTGTCGATAAATCGCAGAAAACTAAGGTTCTTGAAGAGGTCAGGATTCTTCACACGTTGGATCATATAAATGTGCTGAAGTTTCATGATTGGTACGAAACTTCTGCTCACCTATGGTTGGTTTTGGAGTACTGCGTCGGAGGGGATCTGCTTTCCATATTACGACAGGATAGTAAACTTCCCGAAGACTCTGTTCACGATCTTGCGTATGATCTAGTGAAAGCTTTGCAGTTTTTACATTCAAATGGAATAATTTATTGCGACCTGAAACCATCAAATATTCTACTTGATGAAAATGGATGCGCAAAGCTATGTGATTTTGGATTGGCTAGGAAGTTGAAAGATATATCAAAATCTCCTTCTTCCTCGTTACCACGGGCAAAACGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAAGATGGTGGAGTTCATTCTTATGCTTCTGACTTCTGGGCACTAGGCTGTGTACTATATGAATGTTATGCTGGGCGGCCACCCTTTGTGGGAAGAGAATTCACTCAGCTTGTAAAATCCATCATCTCAGATCCGACTCCACCTCTCCCTGGTAATCCAAGTCGACCTTTTGTTAATTTAATTAATTCCCTGTTGGTAAAGAATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCCTTTTGGACGACCAAACTTGCTCTGGTGTCTCTGCCTTCTCAACCTGCATTTGATGATATGATAGAGCTACATACTAAACCTTGCTTGTCAGAACGAAATGGAGATAAATCTTCTCATAACCGGACACCTCCCAAATATCGTGAAAAAGATGTCAAAGGGGTGTTGAAGAAGGACGAGAACTCTGTTTTAGGATCTAGAGGCACTGAGACACCAACAAGGGCAACACCAAATGGCCCTAGAACTCAGATAAAAGGATCAAGCAGAACAAATGAGGTAAAGCAGAAAGACCATTCCAATGTTAAGAAGGGTGTGAATCTATTGAGATTGTCAAGAATAGCGAAAACAAATTTACAGAGGGAAAATGAGAAAGAAAACTATCGACGCCCCTTGCCTAATAATTCTGAGAATGATTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAATGAGAATACTGAAGATGATACACATGAAGAAACTGATGGCAATGAACAAACAACTTCTGTGCCCGATGAGAAGATAGATAATCATTTTCTGAATCAGGGACAAACAGAGGAGCTTGAAAATAATACACACCAGTTGGATACCCCATCTGCTGTTAACCCTCCAGTCTCAGATGATCCAAGGTCATTTGATCATGAATCAACTCCTGACCATCCTGACATATCTGGTATTTCTCCCAGTGTGAGCCCTCAGGTGAAAAAGCATAGAGCTAAAGAAGACACAGGATCTGGCCTTGACTCTGATTCTTCAAGGTTGTCTAACAACCTTTCCGAGGTTCTTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATGCCTAGCAGAAAAGTTGATAAAGTCTCAGAAGTCATTCCTTCACTCCCTTTTGAGGCATTGCAAGCGTCTGATTTTGTTAAGATGCCTAAAGAGCAATTGGAGGCAGTCCACAACCGAATATTAACCATTTTGAATGGAAATACCAGCATTGGAGAGAAACAAAATGTGATTAGGTATCTTGAGATGTTGAGCATTAATGCTGATGCAGCTAATATCTTGACCAATGGGCCAATTATGCTCATGCTTGTAAAATTGCTTCGGCAATCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCACTGATTGGTCTGTTGATTAGGCACTCCACTTTTGTTGATGACAGTTTAGCTAATTCTGGAATTTTAGGTGCACTGACTGATGGCCTTAGAGACAGGCAGGAAAAAGTAAGGAGGTTTTCCATGGCCGCTTTGGGTGAGTTGCTATTTTATATATCCACTCAAAATGCAGACTGCAGGGACAACAATCAACTTGAATCTCCATCAAAGGACAACAGGGCAACATATGGCTGGCAGGTTCCAAATTCGTTAATTTCACTTGTGTCATCAATGTTGAGGAAGGGCGAGGATGATATAACTCAATTGTATGCATTGAGAACAATAGAGAATATTTGCAGTCAAGGAGGGTTCTGGGTGGGGCGATTGACCAGTCAAGATGTTTTTAGTAATCTCTGTTATATCTATAGGGCGGCAGGGAAACAAGAGAGTATGAGGCTCACTGCAGGATCATGCTTGGTGCGCCTTGTTCGTTTTAATCCTACTAGCATTCAGTCTGTTGTTGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTAAAGGGCAGTCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACATAGCAATGCTTGGAAGTCACTTGTTCACAAATATTGGAAGATACCTTGTACAACTTGCCGAGGATAAAAATCTGATCCCAAGTCTTTTGTCTCTTGTTGAGCAAGGTAGTGAAGTTTTAAGAGGAAAGGCACTAGTTTTTGTGGCTCTCCTCTGTAAGCATGGCAGGAGGTGGCTTCCACACTTCTTTTGTAGTCAAAAGTTGCTTTCTGTGGTGGATAGACTGGGAAAAGAGAAAGATTCCTATGTGAGACAGTGTTTGGATGCATTTGTGCATATTGTGGCATCCAGTATTCCAGGTTTATTGGATATAATAACAGGGGAGGTCCAGCAAATGATGGGAGGAAGGCGCCATGGACACATCTCTGCCCTTACCAGCAGATCTTCAAAAGCCAACATTCATTTGTTTCCTGTTGTCCTTCATCTTCTTGGAACTTCAACTTTTAAGCACAAAGTCGTGACACCACAAGTCGTACTTCAATTGGCGAATCTAATTAAACTCGTCGAGACACCATTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTCGAGTCTCTCACAGAGGAATCTCCTATAATTCTTGGCAATGCTGACATTTTCATACGTGAAATCCTCCCTAGTTTGACAGTTCTCTACAAGGGTAACAAGGATGGTGACGCCAGGTTTTTGTGCCTTAAAATTCTTTTTGATGTGATGATCATTCTTTTGAGTGAACCAATTGACGAAGAGCAACGATTAAAGGATCTGAAATTCATATCAAATACCCGTTTTCTTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCTATTCCTATTTATGCCCAGAAGCTTCTTGTTATGCTGCTGGAGTTCAGTTTTATTGCAATTCCAGACATTCTACACATGAAGACAATTTCACAATGCTTTGAGTTCTTGCTTGGTGATCTCTCGAATGCAAATGTGAATAATGTTAAGCTGTGTCTTGCTCTAGCTTCTGCTCCTGATATGGAGTCCAAATTACTCTCTCATTTAAAGGTGGTTAGGAGGATTGGCAACTTACTTGAGTTTGTACACGCAAAGGGCATGGAAGATTTGCTGGAACCAACTCTTGGGTTGTGTAGGGCTTTTATAGCACGTTCAGTCTGTACAAAAGGCTTGAGCAGCACAACAGAACCAACTCTCTTAGGTGACTGTCCTCCCGAGTTGAGTGGTGGTGCTGTGGATCCCCAGCAATGCATAAAAGATATCGCTGACTTTGGAAGCAATTTTGGTGTCTTGCTAGAGTTGAGTGCCTCTGCAGAAACCAGTATTGCTGATATAGCTTCTGAATGTGTTGTTTTACTGTTCAAGGCTTCTCCTAGAGAAGCCACCACTGGTATACTAACCAATCTTCCCAAGGTCACTGTGATCCTAGAGAGCTGGAATAGAGGCATTCCTCACTTGATGGTGCAGCGAATGCTTCATTCTCTAGGTTATGCTTGCAAGCAATACTTACTGCATGCAATGATATTGTCAATATCTAAACCGGAGATTTCAAGAATTGAAGTTGTTGTTTCTGAACTCAAAAGTTCAGGTGTACCAGCCTTAGCTAAAACTGCTGCGCTAGCAGCCTTGGAATTGCAGCGGTTGCCTCGCTGCATTTGA 4110 0.4204 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLEEVRILHTLDHINVLKFHDWYETSAHLWLVLEYCVGGDLLSILRQDSKLPEDSVHDLAYDLVKALQFLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKSPSSSLPRAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKNPAERIQWPELCGHAFWTTKLALVSLPSQPAFDDMIELHTKPCLSERNGDKSSHNRTPPKYREKDVKGVLKKDENSVLGSRGTETPTRATPNGPRTQIKGSSRTNEVKQKDHSNVKKGVNLLRLSRIAKTNLQRENEKENYRRPLPNNSENDSEVKIENTDMELDFNENTEDDTHEETDGNEQTTSVPDEKIDNHFLNQGQTEELENNTHQLDTPSAVNPPVSDDPRSFDHESTPDHPDISGISPSVSPQVKKHRAKEDTGSGLDSDSSRLSNNLSEVLWHPSDLSVRPVMPSRKVDKVSEVIPSLPFEALQASDFVKMPKEQLEAVHNRILTILNGNTSIGEKQNVIRYLEMLSINADAANILTNGPIMLMLVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLANSGILGALTDGLRDRQEKVRRFSMAALGELLFYISTQNADCRDNNQLESPSKDNRATYGWQVPNSLISLVSSMLRKGEDDITQLYALRTIENICSQGGFWVGRLTSQDVFSNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPTSIQSVVEKLSFKDLASALVKGSPREQQISLNLLNIAMLGSHLFTNIGRYLVQLAEDKNLIPSLLSLVEQGSEVLRGKALVFVALLCKHGRRWLPHFFCSQKLLSVVDRLGKEKDSYVRQCLDAFVHIVASSIPGLLDIITGEVQQMMGGRRHGHISALTSRSSKANIHLFPVVLHLLGTSTFKHKVVTPQVVLQLANLIKLVETPFQGRDDFQITLLRIFESLTEESPIILGNADIFIREILPSLTVLYKGNKDGDARFLCLKILFDVMIILLSEPIDEEQRLKDLKFISNTRFLPLYPTLIEDEDPIPIYAQKLLVMLLEFSFIAIPDILHMKTISQCFEFLLGDLSNANVNNVKLCLALASAPDMESKLLSHLKVVRRIGNLLEFVHAKGMEDLLEPTLGLCRAFIARSVCTKGLSSTTEPTLLGDCPPELSGGAVDPQQCIKDIADFGSNFGVLLELSASAETSIADIASECVVLLFKASPREATTGILTNLPKVTVILESWNRGIPHLMVQRMLHSLGYACKQYLLHAMILSISKPEISRIEVVVSELKSSGVPALAKTAALAALELQRLPRCI* 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1668 1369 CDD STKc_ULK4 3 257 - -
Pvu6g1668 1369 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1668 1369 MobiDBLite consensus disorder prediction 370 385 - -
Pvu6g1668 1369 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1668 1369 SUPERFAMILY ARM repeat 567 919 IPR016024 -
Pvu6g1668 1369 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Pvu6g1668 1369 Gene3D - 557 917 IPR011989 -
Pvu6g1668 1369 MobiDBLite consensus disorder prediction 404 418 - -
Pvu6g1668 1369 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1668 1369 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1366 IPR044591 GO:0000911|GO:0000914|GO:0008017
Pvu6g1668 1369 MobiDBLite consensus disorder prediction 319 343 - -
Pvu6g1668 1369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Pvu6g1668 1369 MobiDBLite consensus disorder prediction 450 510 - -
Pvu6g1668 1369 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pvu6g1668 1369 MobiDBLite consensus disorder prediction 283 358 - -
Pvu6g1668 1369 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Pvu6g1668 1369 MobiDBLite consensus disorder prediction 283 318 - -
Pvu6g1668 1369 MobiDBLite consensus disorder prediction 370 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1668 Pvu-Chr6 27244833 27252425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1668 1 246 AGC Kinase Gene Family AT1G45160 34.058 2.21e-35 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Pvu6g1668 Pkinase 2.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1668 K17545 - gmx:100777288 2481.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1668 6 27244833 27252425 Pvu6g1668 6 27244833 27252425 ECH