Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1667 ATGGAGTGCAATAAAGAAGAGGCCGTAAGGGCCAAGGAAATTGCTGAACGGAGAATGCAAAACAAAGATTTTAATGGGGCTCGAAAATTTGCTCTTAAGGCTCAGCAGCTATATCCTGATCTGGAGAATATTAATCAAATGCTTATTGTCTGTGATGTGCATTGCTTTGCTGAGCAGAAATTGTTTGGCAATGAGATGGACTGGTATAAAATTCTTCAAATTGAGCTGATGGCTGATGATACAACCATCAGGAAGCAATATAGGAAGTTCGCCCTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGCGCAGAAGCTGCGTTTAAGCTGATTGGGGAAGCTCAAAGAGTTCTTCTGGATGGAGAAAAACGATCTAGGCTTGACATGAATCTGCGCAGGGTTCCAATGAACAGAACTACCGTGCAATCTCATCATCAGCAGAATGTTCAGATGAATTTTAATCCTGTGATGCAAACCAGTGTTAGGCCCAATTTTACAAACTTAAATCCCCATCAGCAACAACAGTCTGGGCAGACATCTCAACAGGGGCCTAATGGTGGCCGCCCTACTTTTTGGACTATGTGCACATTTTGTTCTGTTAGATATGAGTATTATAGGGAAGTTTTAAACAGATCTCTTCGCTGTCAACATTGCAATAGGCCCTTCATTGCATATGATGTTACTATGCAAGGTAGAGTACCAGCAACTAATTCAAGTCAGCAAGCTTTTGGTGTGCAGAACTATAGTCAGAATCATGGCACTTTCAATGTTGGTGTTGGATCTCAAGGTAATTTTGATACCCGCAGATCAAATATTGAATCACATGAAAACAAAGGTCATACTGTGGATGACCCTGTGAAGCCACGTGGAAATAGAAGAAGAAAGCGGGCAGCTGAATTCAGTGAAAGTTCTGAATCTGTGGGGAGTACTGATTCTGAATCTGAAGAGGTTATTCATTATGACAATGATGGTTTTTCTACCCACAGAGAAGAGAATCCACGTAGATCTACGCGGCAAAAGCATCAGGTTTCCTACAAGGAAAATGTGAGTGATGATGAAGGGACTGAATCTCCATCTGGTGCTGGTGAAGTGGAGCATGGAGGGGCAGCCAAAATTAATGAACAGAATGGTTTGGCTGCTGATAAGAAAGATCAGCGGCAGGTAAAGCAGAAGCAGAGCTTTTATCCTAAAGAGAGCGTTTTAAATATAAAAGAGGAGCTTAAGGAGGTGAGGGAAAAAGAGGCAGTGGGTATCTCAAAGACAGACAAAACTTCAGAGCATTCACTCTCGAAATCAACAAATCAACCAGATAATTTTGTTTATCCAGATGCAGAATTCAGTGACTTTGACAAAGACAAGAAAGAGGGGTCTTTTGCTGCTGGGCAGATTTGGGCTGTTTATGATACTGTAGATGGTATGCCTCGATTCTATGCTTTAATCAGAAAAGTTCTCTCTCCTGGATTCAAGTTGAGGATAACATGGTTTGAACCAGATGCAGAAGAGAAAGATGAAATCCACTGGATAAATGAGCAATTGCCAGTTGCTTGTGGGAAACATAGACTTGGTAATACAGAAAACACTGAAGATCGACTGATGTTTTCTCATCTTATTGTTTGTGAAAAGATTGGCCGCGGGACATATAAAGTATATCCTAGAAAGGGAGAAATTTGGGCTCTCTTTAAAAATTGGGATATCAAATGGCATATGGATGTGGAGTCTCATCGGCAGTATGATTTTGAATTTGTCGAAATCTTATCAGATTACATTGAAGGTGTGGGAGTAGTTGTTGCGTACTTGGCTAAGTTGAAAGGTTTTGTGTCTCTCTTCACTAAAATGGATGGAGGCAAGCATACAATTCAAATTCCATCAGCCGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGTTGGTGTTCCTGTAGGGTCTTGGGAACTTGATCCTGTATCCTTGCCAATGCATATGGAGGAAATTGCTGTTCCTGGAGATTTGGATGTAAATGTTGGTCATGGTCCATCCAGTGGGAATGGCACAAGGTCTTCAGATATGTTGAAATTTGCTAGGAAGGTAGATGTCTCTACTGCAAAGCTTAATGTGGAAAGAAACAATTCTTCAAAGGAGAACAAGGATCCCGTAGATTATACTGGTAGTGATCCTTCAGCCTCAGCCGCAGATGCTTTTGAAATTCCAGATCCTGAGTTCTACAATTTTGATGCTTGGAGGTCCATCGAAAAGTTTCAGGTTGGTCAGATTTGGGCATTTTATGGGGATGAGGATGGACTGCCAAAATACTATGGTCAGATTAAGAGGATTAGGACTAGACCAGAAGTTGAGTTGCAAGTTACTTATCTTACTAACTGCTGGCTACCGGAGAACAGTGTTAGATGGGAAGATAAAGACATGCTTATTTCCATTGGCAGATTTAAAATCCAAACGGGTGCCAGTCCCTGCACTTATACTGACACCTATTCTATTTCACATCAGGTGCAGGCTATTATTGACAGTAAGAAGAAGGAATATGAAATTTTTCCAAGGAAAGGCGAAATTTGGGCATTGTACAAGAATTGGACGACTAAAATAAAACGTTCTGATCTGGAAAATTTGGAGTATGACGTAGTGGAAGTTGTTGGAGAAAATGATTTGTGGATGGATGTTTTACCCTTGGAGTTGGTAAGTGGTTATAATTCAGTTTTTAAGGGCAGATCAAATGCAGGATCAGCTGGGACCATGAAAATATTTTGGAAAGAGTTGCTCAGGTTCTCCCACCAAATCCCTGCCTTTAAATTATCAGAAGAACATGGTGGCAGTCTGAGAGGCTTCTGGGAGCTTGATCCGGGAGCACTACCCGTTCATTATTTTAGCAGCAAATAA 2892 0.4111 MECNKEEAVRAKEIAERRMQNKDFNGARKFALKAQQLYPDLENINQMLIVCDVHCFAEQKLFGNEMDWYKILQIELMADDTTIRKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDGEKRSRLDMNLRRVPMNRTTVQSHHQQNVQMNFNPVMQTSVRPNFTNLNPHQQQQSGQTSQQGPNGGRPTFWTMCTFCSVRYEYYREVLNRSLRCQHCNRPFIAYDVTMQGRVPATNSSQQAFGVQNYSQNHGTFNVGVGSQGNFDTRRSNIESHENKGHTVDDPVKPRGNRRRKRAAEFSESSESVGSTDSESEEVIHYDNDGFSTHREENPRRSTRQKHQVSYKENVSDDEGTESPSGAGEVEHGGAAKINEQNGLAADKKDQRQVKQKQSFYPKESVLNIKEELKEVREKEAVGISKTDKTSEHSLSKSTNQPDNFVYPDAEFSDFDKDKKEGSFAAGQIWAVYDTVDGMPRFYALIRKVLSPGFKLRITWFEPDAEEKDEIHWINEQLPVACGKHRLGNTENTEDRLMFSHLIVCEKIGRGTYKVYPRKGEIWALFKNWDIKWHMDVESHRQYDFEFVEILSDYIEGVGVVVAYLAKLKGFVSLFTKMDGGKHTIQIPSAELFRFSHRVPSFKMTGQERVGVPVGSWELDPVSLPMHMEEIAVPGDLDVNVGHGPSSGNGTRSSDMLKFARKVDVSTAKLNVERNNSSKENKDPVDYTGSDPSASAADAFEIPDPEFYNFDAWRSIEKFQVGQIWAFYGDEDGLPKYYGQIKRIRTRPEVELQVTYLTNCWLPENSVRWEDKDMLISIGRFKIQTGASPCTYTDTYSISHQVQAIIDSKKKEYEIFPRKGEIWALYKNWTTKIKRSDLENLEYDVVEVVGENDLWMDVLPLELVSGYNSVFKGRSNAGSAGTMKIFWKELLRFSHQIPAFKLSEEHGGSLRGFWELDPGALPVHYFSSK* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1667 963 Pfam DnaJ domain 67 128 IPR001623 -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 412 444 - -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 412 427 - -
Pvu6g1667 963 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 254 268 - -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 160 186 - -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 704 732 - -
Pvu6g1667 963 PANTHER - 1 961 - -
Pvu6g1667 963 CDD DnaJ 67 120 IPR001623 -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 374 393 - -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 269 301 - -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 312 353 - -
Pvu6g1667 963 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 961 - -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 377 391 - -
Pvu6g1667 963 Gene3D DnaJ domain 64 182 IPR036869 -
Pvu6g1667 963 SUPERFAMILY Chaperone J-domain 64 140 IPR036869 -
Pvu6g1667 963 MobiDBLite consensus disorder prediction 254 365 - -
Pvu6g1667 963 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pvu6g1667 963 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pvu6g1667 963 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pvu6g1667 963 SMART dnaj_3 66 123 IPR001623 -
Pvu6g1667 963 Pfam Domain of unknown function (DUF3444) 437 642 IPR024593 -
Pvu6g1667 963 Pfam Domain of unknown function (DUF3444) 733 939 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1667 Pvu-Chr6 27232846 27238286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1667 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.498 7.16e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1667 - - gmx:100779228 1575.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1667 6 27232846 27238286 Pvu6g1667 6 27232846 27238286 ECH
Pvu3g1041 3 24403770 24408287 Pvu6g1667 6 27232846 27238286 PCT