Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1641 ATGGGTTGTGTCCATGGCAAGTGCTGTACCCGTTACCCTTCCCCATCAGTGGGTGGCTCCAGAGACTTCAGAGAACTTGGCCCTTACAGTGCCCAGAGGAAACACATTCTCACTCAGAGTTCACTGCAATTTGTTCCTGTTCCTTCCCATAACTTCACTTTAGAATACTCTGTGCTCACTCAGAGGGGGTACTACCCTGATTCACCCGATAAAGAAAACCAGGATAGTTTCTGCTTTAGGACACAGTTCCAAGGTAACCCGAGTGTCCATTTCTTTGGTGTTTATGATGGGCATGGCGAATTTGGTACCCAGTGTTCAAACTTTGTGAAGGATAGGTTGGTGGAAAATTTGTCAAGTGACACTGCATTGTTGGAGGACCCTGTTAAGGCTTACACTTCTGCATTCTTGACCACAAATGAGGACTTGCATAAGAATGAGATTGATGATTCTTTGAGTGGCACCACTGCAATTACGGTGCTGGTTATTGGGAACACCCTTTATGTTGCTAATGTTGGTGATTCGAGAGCAGTGCTGGCTGTTAAGGATGGGAACCGGATTGTTGCTGAGGACTTGTCCACTGATCAGACACCTTTTAGGAGAGATGAGTATGAGAGAGTGAAGCTTTCTGGGGCAAGGGTTTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCGGATATTCAGACTTGGGGTGATGAAGAGAGTCAGGGTGATGACCCTCCTAGGTTGTGGGTTCAGAATGGAATGGTTCCTGGAGCTGCATTTACAAGGAGTGTAGGGGATATGTTGGCTGAGACAATTGGTGTAATTGCTGTTCCTGAAGTGTCAACGGTCCAGCTTACACCTAACCATCTTTTCTTTGTTGTTGCAAGTGATGGTGTATTTGAGTTCCTATCCAGCCAAACTGTTGTTGATATGGCAGCAAGTTATTCAGATCCCCGTGATGCATGTGCTGCCATTGCCGGAGAGTCATATAAACTATGGTTAGAACATGAGGGTCGAACCGATGATATAACAATTATTATTGTTCAGATCAAAGGCCTATCTAATTCAGGTACATCTGGACTTGGATCAGGTGAGGTCAATGTCAGTACTGTAACAAGGACCAAGAGCAAGAGGGTAAAGGGAGCGTCTGAATTATCTGCCACTACTGGGTTAGATGTTTATCGTTCAGTCAGGAATGGCTTCTCTGATTTACAGTCCTGTCCACAGCATGTGGTCTCCACTAGAAGCCCAGCCATAGTGGTCCCTTCTCCAGCATGTCAAACATCTATTGAATTGTGA 1284 0.4564 MGCVHGKCCTRYPSPSVGGSRDFRELGPYSAQRKHILTQSSLQFVPVPSHNFTLEYSVLTQRGYYPDSPDKENQDSFCFRTQFQGNPSVHFFGVYDGHGEFGTQCSNFVKDRLVENLSSDTALLEDPVKAYTSAFLTTNEDLHKNEIDDSLSGTTAITVLVIGNTLYVANVGDSRAVLAVKDGNRIVAEDLSTDQTPFRRDEYERVKLSGARVLSVDQVEGHKDPDIQTWGDEESQGDDPPRLWVQNGMVPGAAFTRSVGDMLAETIGVIAVPEVSTVQLTPNHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSGTSGLGSGEVNVSTVTRTKSKRVKGASELSATTGLDVYRSVRNGFSDLQSCPQHVVSTRSPAIVVPSPACQTSIEL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1641 427 Pfam Protein phosphatase 2C 73 320 IPR001932 -
Pvu6g1641 427 Gene3D - 47 347 IPR036457 -
Pvu6g1641 427 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 33 424 - -
Pvu6g1641 427 SUPERFAMILY PP2C-like 44 347 IPR036457 -
Pvu6g1641 427 MobiDBLite consensus disorder prediction 222 241 - -
Pvu6g1641 427 CDD PP2Cc 71 345 IPR001932 -
Pvu6g1641 427 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Pvu6g1641 427 SMART PP2C_4 51 343 IPR001932 -
Pvu6g1641 427 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Pvu6g1641 427 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 33 424 - -
Pvu6g1641 427 MobiDBLite consensus disorder prediction 222 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1641 Pvu-Chr6 27060871 27065095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1641 1 350 PP2C-type Phosphatase Gene Family AT3G06270 72.521 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1641 - - gmx:100817563 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1641 6 27060871 27065095 Pvu6g1641 6 27060871 27065095 ECH
Pvu3g1021 3 23670558 23674138 Pvu6g1641 6 27060871 27065095 PCT