Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1613 ATGAATGGGCCACACAATTATGGGCCTGAAAGGAAGGGTCCAACAAGGAGAAACTGCATGGACTCAAAACCTTTAATCGCTAACCAAACCCTAAACAGGCGTAGAATCTTCTTCCGCACCCACGCAGTTTCTGTGCCTTCACTGTACTATCTCGTGATAATGGTGAGGGTCAGTGTCTTGAATGATGCTCTCAAGAGCATGTACAATGCCGAGAAGAGGGGGAAGCGCCAGGTCATGGTTAGGCCATCCTCAAAAGTGATTATAAAATTCCTCTTGGTGATGCAAAAGCATGGGTACATTGGAGAGTTTGAGTACGTTGACGATCACAGATCTGGGAAAATCGTCGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGCCCCCGTTTTGATGTGGGTGTCAAAGAGATTGAAGGCTGGACTGCTAGGTTACTCCCCTCAAGACAGTTTGGGTATATTGTGTTGACTACCTCTGCTGGCATCATGGATCATGAAGAAGCTAGGAGGAAGAATGTTGGTGGGAAAGTGCTGGGTTTCTTTTACTAG 552 0.4583 MNGPHNYGPERKGPTRRNCMDSKPLIANQTLNRRRIFFRTHAVSVPSLYYLVIMVRVSVLNDALKSMYNAEKRGKRQVMVRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1613 183 SUPERFAMILY Ribosomal protein S8 57 183 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pvu6g1613 183 MobiDBLite consensus disorder prediction 1 21 - -
Pvu6g1613 183 Gene3D - 54 122 - -
Pvu6g1613 183 Hamap 30S ribosomal protein S8 [rpsH]. 55 183 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pvu6g1613 183 Pfam Ribosomal protein S8 60 183 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pvu6g1613 183 ProSitePatterns Ribosomal protein S8 signature. 153 170 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pvu6g1613 183 Gene3D - 123 183 - -
Pvu6g1613 183 PANTHER BNAA02G06730D PROTEIN 54 183 - -
Pvu6g1613 183 PANTHER 40S RIBOSOMAL PROTEIN S15A 54 183 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1613 Pvu-Chr6 26816921 26818563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1613 54 183 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 97.692 9.71e-93 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1613 K02957 - zju:107411046 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0999 3 21671660 21673086 Pvu6g1613 6 26816921 26818563 PCT