Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1576 ATGATCTCTTTAACGAAATGCTCAGCATCATCGCTCACTTGTTCTGCTTTCTCAACCAGAAAACTCCCCCCTGCAAGGCCTCAACTGCTTACATTTCCAACCATTAACAACGTTGAACAAAACACGAGTCCCTCTCAGTTGTGCTCCCAGAAACCGCTCTACCTTTCACCCACAGAGAACATGGCATTGGTGAAGAGAAAGAGGGTGACGGAGTGCCAGGCCTATGAGGCTGACAGGTCACGCCCCATGGAGATTAACATTGAGCTGCCAGGTGAAGATGCTGCCCAGAGGATGAAGATCGGGGTGTATTTTGCCACCTGGTGGGCTTTGAATGTGGTGTTCAACATCTACAACAAGAAGGTTTTGAATGCTTTTCCTTACCCCTGGCTCACCTCCACTCTGTCCCTTGCTGCTGGCTCCCTCCTGATGTTAATCTCCTGGGCCACCAGAGTTGCTGAAGCCCCAACAGTTAACCTCGACTTCTGGAAGGCCTTGTTTCCTGTTGCGGTGGCACATACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAGGTTGCTGTCTCTTTCACTCACATCATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTGTCAAGGTTCTTGCTTGGAGAAGCATTCCCAATGCCGGTTTATCTGTCACTGGTGCCAATTATTGGTGGTTGTGCACTAGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGCTTCATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCAGGAATATATTCTCAAAGAAAGGAATGAAGGGGATGTCTGTTAGTGGAATGAACTACTATGCCTGTCTTTCCATGATGTCTCTGTTGATCCTCACACCTTTTGCCATTGCTGTGGAGGGCCCCAAGGTTTGGGCTGCAGGCTGGCAGTCAGCTGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTAGCTGCTCAGAGTGTCTTCTACCACTTGTACAATCAAGTCTCTTACATGTCTCTTGATCAGATTTCTCCCTTAACATTCAGCATCGGAAACACTATGAAGAGGATTACGGTCATTGTCTCTTCTATTCTTATCTTTCACACGCCTGTTCAGCCCATCAATGCTCTTGGTGCAGCCATTGCAATTCTTGGTACCTTCCTCTATTCACAGGGTAAACAGTAA 1176 0.4753 MISLTKCSASSLTCSAFSTRKLPPARPQLLTFPTINNVEQNTSPSQLCSQKPLYLSPTENMALVKRKRVTECQAYEADRSRPMEINIELPGEDAAQRMKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLLMLISWATRVAEAPTVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSMMSLLILTPFAIAVEGPKVWAAGWQSAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRITVIVSSILIFHTPVQPINALGAAIAILGTFLYSQGKQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1576 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 234 - -
Pvu6g1576 391 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
Pvu6g1576 391 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
Pvu6g1576 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 389 - -
Pvu6g1576 391 PANTHER SOLUTE CARRIER FAMILY 35 29 390 - -
Pvu6g1576 391 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 29 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1576 Pvu-Chr6 26470971 26473964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1576 18 388 Antiporters AT1G61800 77.688 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1576 K15283 - gmx:100804205 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1576 6 26470971 26473964 Pvu8g2738 8 57654293 57658813 ECH
Pvu6g1576 6 26470971 26473964 Pvu6g1576 6 26470971 26473964 ECH
Pvu3g0794 3 11923843 11926752 Pvu6g1576 6 26470971 26473964 PCT