Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1521 ATGCCTGCTCCTCCTTCCCCTCTTTCTCCCTCCCTCGCTTTCATCTTCCTTGCTCTGCTTCCTCTTTCCCTTGCCAACACTGACTCTTCTGATGTTCAAGCTCTCGAGGTTATGTACAATGCGTTGAATAGTTCAACTCAGTTAACGGGTTGGAGAATCGGCGGTGGTGATCCATGCGGAGAGTCATGGAAAGGGGTAACATGTGAAGGTTCAGCCGTTGTTTCCATTGAGCTCTCAGGATTAGGACTCGATGGGACTCTGGGGTACCTGCTTTCGAACCTAATGTCACTCAGAAAGCTTGACTTGAGTGACAACAAGATCCATGATACAATACCCTACCAGTTGCCGCCAAATCTTACAAGCCTGAATCTTGCAAGAAATAATTTATCTGGAAATCTTCCTTATTCCTTTTCTGCCATGGTTTCTCTCAATTATTTGAATTTAAGCAGTAATGCACTCTCCATGACAGTTGGCGATGTTTTTGCTAGTCTTTCAGATCTTGGTATCCTGGATCTATCATTTAATAACTTCTCTGGGGATCTTCCTCCTTCATTTGGTGCATTGACCAATCTTTCTTCTCTTTTCTTGCAGAAAAACCAGATGACTGGCTCTCTTAGTGTTCTCGTTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATAATTTCAGTGGATGGATACCTCGTGAGATTAGTTCCATACATCATTTCATATATGATGGAAATTCATTTGAGAACACTCCTGCTCCTCTTCCACCGGGATTAACTTCACCTCCTCCCAATGGATCTCACAATCATCATCATTCTGGATCTGGTTCACACAATACAACAGAAGCCTCTGATAATGAAAATTCTGATGGCCATACGGGTTTGACAGTGGGGGCTGTTGTCGGCATTGTGTTAGGTTCAGTAGTGGTGGCTGCTATTGTGCTGCTTGCTCTTTTTTTCTTCATCCAAAAGCGAAAGGGGAAGAAAACAGGTGCAAGGAATTTTAGTGGGAGCCTTCCTCATGGAGTTATTAATGTAACTCCCCAGATGCAAGAGCAGAGGGTAAAAAGCGCTGCTGTAGTTACAGATCTCAAGCCTCGTCCAGCAGAAAATGTATCAGTTGAGAGATTACCTGCAAAAAGTGGATCTGTGAGGCACATGAAGTCCCCTATAACCTCAACATCGTACACAGTTGCTTCTCTCCAAAGTGCAACAAATAGCTTTAGTCAAGAATTTATAATTGGTGAAGGTTCTCTTGGCCGAGTTTACAAGGCTGATTTCCCAAATGGGAAGGAAATGGCTATCAAGAAGATCGACAACTCTGCACTGTCATTACAAGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCCTGCGGCACCCAAACATTGTGACATTGACTGGATATTGTGCTGAGCATGGCCAACGACTTCTAGTTTACGAGTATATTGGAAATGGAAATCTGCATGACATGCTCCATTTTTCTGAAGATAGCAGTGGCAAGGATTTGTCTTGGAATGCTCGTGTACGCATAGCACTTGGCACAGCCCGGGCTTTAGAGTATTTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCAGCAAATATATTACTTGATGAGGAGCTAAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTGACTCCAAACACAGAGAGGCAGGTATCAACTCAGATGGTCGGTTCATTTGGTTACAGTGCTCCTGAGTTTGCATTATCAGGAGTATACACTGTAAAAAGTGATGTTTACAGCTTTGGGGTGGTTATGCTGGAATTGTTGACTGGTCGGAAGCCACTAGACAGTTCGCGAATTCGATCAGAGCAGTCACTTGTGAGGTGGGCTACACCCCAACTCCATGATATAGATGCCTTGGCGAAAATGGTGGATCCTACTTTGAATGGCATGTATCCTGCAAAGTCACTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCTGAATTTCGACCTCCAATGTCTGAGGTGGTGCAAGCATTGGTCCGGCTAGTGCAAAGAGCAAGTGTGGTTAAAAGACGACCCAGTGACGACTCTGGCACTGGTCACAAGACCCCAGAACATGAGGCCATAGACATGTCATTTTAA 2142 0.4407 MPAPPSPLSPSLAFIFLALLPLSLANTDSSDVQALEVMYNALNSSTQLTGWRIGGGDPCGESWKGVTCEGSAVVSIELSGLGLDGTLGYLLSNLMSLRKLDLSDNKIHDTIPYQLPPNLTSLNLARNNLSGNLPYSFSAMVSLNYLNLSSNALSMTVGDVFASLSDLGILDLSFNNFSGDLPPSFGALTNLSSLFLQKNQMTGSLSVLVGLPLDTLNVANNNFSGWIPREISSIHHFIYDGNSFENTPAPLPPGLTSPPPNGSHNHHHSGSGSHNTTEASDNENSDGHTGLTVGAVVGIVLGSVVVAAIVLLALFFFIQKRKGKKTGARNFSGSLPHGVINVTPQMQEQRVKSAAVVTDLKPRPAENVSVERLPAKSGSVRHMKSPITSTSYTVASLQSATNSFSQEFIIGEGSLGRVYKADFPNGKEMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLTGYCAEHGQRLLVYEYIGNGNLHDMLHFSEDSSGKDLSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRIRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDDSGTGHKTPEHEAIDMSF* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1521 713 MobiDBLite consensus disorder prediction 690 713 - -
Pvu6g1521 713 ProSiteProfiles Protein kinase domain profile. 404 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1521 713 CDD STKc_IRAK 410 682 - -
Pvu6g1521 713 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pvu6g1521 713 MobiDBLite consensus disorder prediction 260 286 - -
Pvu6g1521 713 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 25 709 - -
Pvu6g1521 713 SUPERFAMILY Protein kinase-like (PK-like) 381 679 IPR011009 -
Pvu6g1521 713 ProSiteProfiles Leucine-rich repeat profile. 96 117 IPR001611 GO:0005515
Pvu6g1521 713 MobiDBLite consensus disorder prediction 248 286 - -
Pvu6g1521 713 SUPERFAMILY L domain-like 35 235 - -
Pvu6g1521 713 Gene3D Ribonuclease Inhibitor 28 276 IPR032675 -
Pvu6g1521 713 Pfam Protein kinase domain 407 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1521 713 PANTHER OS01G0253100 PROTEIN 25 709 IPR045271 GO:0004714|GO:0006468
Pvu6g1521 713 Gene3D Transferase(Phosphotransferase) domain 1 482 701 - -
Pvu6g1521 713 Gene3D Phosphorylase Kinase; domain 1 366 481 - -
Pvu6g1521 713 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1521 Pvu-Chr6 25986436 25992838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1521 140 713 Strubbelig Receptor Gene Family AT4G22130 69.896 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pvu6g1521 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1521 - - gmx:100781455 1181.78