Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1502 ATGGCGGGGTCATGTTTCCACGGACTAAGGCTAAGGATGTCTAAGAGTAAACCTTTACTTTCATCTTCCTCCAAGTCACGGTTGGAGAATGACACGGAGAACATGGAAAGGAAGAGATTTAATAGCACGGAATCGTGGTCCATGATATTGGACTCAATGGATACATGGGAGGCTTCAAAGGAAGACCAGGAGGGGGAGCAAGAGGAATGGACTGCAGACCTATCACAGCTTTTTATTGGTAACAAGTTTGCTTCTGGAGCTCACAGTCGAATTTACCGTGGAGTCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAGGATGCCAAGCCAGGATGAGGAGAAAAAGGACTTATTAGAGGAGCAATTTAACTCTGAAGTGGCTTTACTTTCACGTCTCTTCCATTTTAACATAGTGCAGTTTATTGCAGCATGCAAAAAACCGCCCGTGTACTGTATCATAACAGAATACATGTCACAAGGGAATCTGAGGATGTATCTGAACAAGAAAGAGCCATACTCACTCTCAATGGAAACAATACTAAGGTTGGCTCTAGATATATCAAGGGGCATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACTTGAAGTCAAGTAATTTGCTCCTGGATGATGATATGAGGGTTAAGGTGGCGGATTTTGGCACATCTTGTCTTGAAACAAGATGCCGGAAAAGCAAAGGGAACTCGGGAACATATCGTTGGATGGCACCAGAGATGATTAAGGGAAAACCTTACACCCGAAAAGTTGATGTGTACAGTTTTGGTATTGTGCTTTGGGAGCTCACTACTTCTCTACTTCCTTTCCAAGGAATGACCACAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTCTGCCAGCTAGTTGTGATCCAGCAGTAGCACATCTGATAAAGCATTGTTGGTCAGCAAACCCCTCGAAACGGCCAGATTTCAGTTATATTGTGTCTACTTTGGAGAAATACGATGAGTGTCTGAAGGAGGGCCTACCAATGAGCCATCATCATTCAGGGCTAGTCACCAGAAATGTAATCGTTGAACGCCTAAAAGGCTGTGTATCATTGAGCTCCTCCATACCTGTGTATGCTTGA 1128 0.4441 MAGSCFHGLRLRMSKSKPLLSSSSKSRLENDTENMERKRFNSTESWSMILDSMDTWEASKEDQEGEQEEWTADLSQLFIGNKFASGAHSRIYRGVYKQRAVAVKMVRMPSQDEEKKDLLEEQFNSEVALLSRLFHFNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSMETILRLALDISRGMEYLHSQGVIHRDLKSSNLLLDDDMRVKVADFGTSCLETRCRKSKGNSGTYRWMAPEMIKGKPYTRKVDVYSFGIVLWELTTSLLPFQGMTTVQAAFAVAEKNERPPLPASCDPAVAHLIKHCWSANPSKRPDFSYIVSTLEKYDECLKEGLPMSHHHSGLVTRNVIVERLKGCVSLSSSIPVYA* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1502 375 PRINTS Tyrosine kinase catalytic domain signature 155 168 IPR001245 GO:0004672|GO:0006468
Pvu6g1502 375 PRINTS Tyrosine kinase catalytic domain signature 193 211 IPR001245 GO:0004672|GO:0006468
Pvu6g1502 375 PRINTS Tyrosine kinase catalytic domain signature 239 249 IPR001245 GO:0004672|GO:0006468
Pvu6g1502 375 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Pvu6g1502 375 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Pvu6g1502 375 Pfam Protein tyrosine and serine/threonine kinase 79 331 IPR001245 GO:0004672|GO:0006468
Pvu6g1502 375 ProSiteProfiles Protein kinase domain profile. 77 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1502 375 Gene3D Phosphorylase Kinase; domain 1 66 159 - -
Pvu6g1502 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Pvu6g1502 375 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 363 - -
Pvu6g1502 375 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 363 - -
Pvu6g1502 375 MobiDBLite consensus disorder prediction 17 39 - -
Pvu6g1502 375 SMART serkin_6 77 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1502 375 CDD STKc_MAP3K-like 84 331 - -
Pvu6g1502 375 Gene3D Transferase(Phosphotransferase) domain 1 160 355 - -
Pvu6g1502 375 SUPERFAMILY Protein kinase-like (PK-like) 54 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1502 Pvu-Chr6 25784804 25789531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1502 1 366 MAP Kinase Kinase Kinase AT1G62400 76.781 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pvu6g1502 PK_Tyr_Ser-Thr 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1502 - - gmx:100810171 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0861 3 13348702 13352269 Pvu6g1502 6 25784804 25789531 PCT