Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1476 ATGCAAACGTCCCAGAAACACCCAACTTCATCTGGTATCCATTTATACCACCAGCCTGTGCAAGACATCGATTCCTACACTCGTTACCAAGTATTGCAAAGCAATTCTTGCCATGAAATCCATGATAGCAGCAGTCAGGGAACCACTATTTCATTTGAGCCCAGCAAGGAGCAATACTTTACCCTTGAATCATCCCCACAAATCAATGATCTCATAGGTTGTGATTCTCCTTCCTATGCTAGTGTATCGTCCAATTCCAATAGGAGTCCTTTTTCTCCACATGCTTCTCATTCATACCATTCAGATCAGCATCAGTCCTCTGACAACAACTATGGATCACCAACAAGTGCAAACTCTAGTGCTGATGAGAGCTATGAGTTGAAGCACAAGCTTAGAGAACTTGAGATTTCATTGTTGGGGCCTGATTCAGATATTGTTGACAGTTGTCAGTGTTGCTACAAGGGAAGCCACCACGGAGCATCTCCAATGGCTAAGTATAATTGGGATCAGATTGTAGATATGATTCCAAAACTAGACTTGAAAGAAGTCCTCAGTCGGTGTGCACAGGCTGTATCTGATGATGATATTGAAACAGCGGTGGGATTTATGAATAAAGTATTGCCAAAGATGGTATCAGTAGGGGGTGATCCAATCCAGAGGTTAGGGGCCTACATGTTGGAGGGTCTAAGAGCAAGATTGGAGTCTTCAGGGAGCCTAATCTACAAAGCCTTGAAATGTGAACAACCAGCAAGCAAAGATCTCATGAGTTACATGCACATCCTGTGCCAGATTTGCCCATATTGGAAGTTTGCTTACGTATCTGCCAATGCTGTCATTGGAGAAGCAATGCTAAATGAATCAAGAATTCACATAATTGACTTCCAAATTGCACAGGGCACTCAGTGGATGCTGCTTATTCAGGCTCTTGCATCTCGTCCAGGTGGACCACCTTTCATTCGTGTAACTGGTGTCGATGATTCCGAATCCTTTCATGCAAGAGGTGGAGGACTTGAAATTGTAGGAAAACGCCTCTCAGATTATGCCACATCTTGTGGAGTGCCATTTGAGTTCCAAAGTGCTGCAATGTCTGGATGCGAGGTTGAACTAGAAAACCTTGTAGTTCGTCCCGGGGAAGCTCTGGCCGTGAATTTCCCTTTTATTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCACAGGGACAGGCTATTAAGACTGGTGAAGAGCTTGTCACCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCCCCCTTTTTCCAAAGGTTTGTTGAGACCTTCAGTTATTACAGTGCTATGTTTGAGTCAATAGACGTGGCCCTCCCCGGAGAGGATAAGCAAAGGATCAGTGCAGAACAACACTGTGTGGCTCGTGACATTGTTAACATGATAGCTTGTGAGGGGCCTGAGAGGGTGGAAAGGCATGAACTGTTCGGGAAATGGAGGTCAAGATTTTCAATGGCTGGTTTTGCACCATGCCCTTTGAGTTCCTCAGTCACTAATGCAGTTAGAAATATGTTAAGAGAATTCAATGGAAACTATAGGCTAGAACATAGAGATGATGCACTCTATCTAGGATGGAAGAGAAGAGCCATGTGTACATCTTCTGCTTGGAGATGTTACTGA 1662 0.444 MQTSQKHPTSSGIHLYHQPVQDIDSYTRYQVLQSNSCHEIHDSSSQGTTISFEPSKEQYFTLESSPQINDLIGCDSPSYASVSSNSNRSPFSPHASHSYHSDQHQSSDNNYGSPTSANSSADESYELKHKLRELEISLLGPDSDIVDSCQCCYKGSHHGASPMAKYNWDQIVDMIPKLDLKEVLSRCAQAVSDDDIETAVGFMNKVLPKMVSVGGDPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPASKDLMSYMHILCQICPYWKFAYVSANAVIGEAMLNESRIHIIDFQIAQGTQWMLLIQALASRPGGPPFIRVTGVDDSESFHARGGGLEIVGKRLSDYATSCGVPFEFQSAAMSGCEVELENLVVRPGEALAVNFPFILHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETFSYYSAMFESIDVALPGEDKQRISAEQHCVARDIVNMIACEGPERVERHELFGKWRSRFSMAGFAPCPLSSSVTNAVRNMLREFNGNYRLEHRDDALYLGWKRRAMCTSSAWRCY* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1476 553 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 550 - -
Pvu6g1476 553 MobiDBLite consensus disorder prediction 79 124 - -
Pvu6g1476 553 Pfam GRAS domain family 181 551 IPR005202 -
Pvu6g1476 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 550 IPR005202 -
Pvu6g1476 553 MobiDBLite consensus disorder prediction 79 122 - -
Pvu6g1476 553 ProSiteProfiles GRAS family profile. 171 551 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1476 Pvu-Chr6 25588679 25592386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1476 1 551 GRAS Transcription Factor Family AT4G17230 58.123 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu6g1476 GRAS 3.4e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1476 - - gmx:100819190 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1476 6 25588679 25592386 Pvu6g1476 6 25588679 25592386 ECH
Pvu3g0883 3 14385778 14389474 Pvu6g1476 6 25588679 25592386 PCT