Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1467 ATGTCTGGTGGGGAGGTAGGTGGTGGGAGTGTTTTTGTGGCTTGGGAGGAGCAGGTGATATGCCAGGAGCGTGGTAACCGAGTGATTCACTTCTATTTGAAGGATGCGTTGGGGAATTCAGTGCTGGCGGTTGTGGGGACCGAGAGGAGTGTGAGACACATGATGTATGTTGTCCCTGACCATTTCTTGCAGGCCTATGGATCCACTCAGCCCATCAATGCTTGCAAATGGAGGGCGAGGCGAGAGGTTGTTGATTGGCTTACTTGTTTGGTCTCCCGGTCACACCATGCAGGTGTACAATTGGATGATTTAGTACAAGCTGATGAATCTCTCAAGATTTTAATGCCTGGAATTAATGTCAGTAATAGAATTTTACCCGATAAAATGATTTCTAGGAAACTAAAATTCCAAAGTTCGGATATTGAATGGTCAGGCATTACTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCAGGGTTTTGCAGGAATGGAACAACCATAAATGTTCATTCATTTGTATACATTATGGCTGAAGAAGAAAACCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAAAGACAAAAAAAGGTGAAGGTACGTTGGTTTCATCATGGTCAGGAAGTTAAGCAGGTGATTCCACAGCTGAATCTGCAAGAGGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGCGTCAATGGTCCTGCGACTGTTTTGACTCCTAAGCATTATGAGAAATACCTGGCTGCTGTGCCTCATACCTCTTTATCTGAGATACATACATGCTTTAGGCAGTTTAAAAACAATAGGCTTAAGCCCTTCACACTTACAAAGTTGCGTGGATATAGTAACCAGCCTGTTCTTTCTTGTTTAAATAGTCCTATTCTCTCCAAGAGAAAGACAAAGTGTGAAAAGTCACACACAGATGATGATGATGAGAACTTCACTCAAGATGATCCTTTAAGGTCCATCAATAAGAGGATTAGAAGTTCTAAGGATCAAATATTTGAGAAGGGTTTTTCTGGTCTGCAAGTCTATGCTCCTACCAATGAAATGACAAAATGTGGACTACAATATCCTAGTTTAAAATTAAAACTATCAAGAAAAACAGTGGGTATAAAGGTTATTGGACCAAAGCCTAAACTGTCTTTTCAGGTTGGTGCTAAGATAGAGGTTCTTTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTAAAATCTTGAGTGTGTCTCCAAGGCTGCTGAAGGTCCAGTATGATAATTTGGTTGATATAGAGGGACCACAGAACCTAGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCTACTGATAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTCAGGCCATGCCCTCCTGAATACAATTCAGGTCGTATTTTTGAGATTGGAGCAGCAGTGGATGCCTGGTGGTGTGATGGATGGTGGGAAGGTGTCGTAACTGCAGTTAATGTCAGTGGAGATGGAATCCTGCAAGTTTATACCCCTGGTGAAGAGAGGTTCCTAAAGGTTGAGCAGAAGAACATTCGGATTTCCCGAGACTGGATCAATAACAGATGGATTGATATACGAGGAAAGGCTGACATTTGCAGTTATTTAACTTCAAATGTCAGGTCCAGCATCGGGATGTCAGCTAATTCTGCAGTGGTAGATGGATCTTTGTCTGATTGCTCTGCTTTAGAAAGTAAATCATCATCAATTCCCAAAGTTGAAGTTGCTAAGAAGGTTGAGTCAGAATCGTTTGGTTTGGAAATCCCTGTTGATCCGGAAAATATGAAGGGAATAACTCTGAGGGAGCCACTATATGCCATTCACGAGGACAAGGATAACAACTCTGGTGGTGGCTGTGATGATGAAGCTGACAAGGCTGTGAAGACACTTCTGGCCTTAAATGAACACAAGGATAATAACTCTTGTAGAGACAGTGATGATGACACTGAGGGTGATGATAATGTCAATGGTGATGATGTTGACAATGACGAGGCCAGTGAAGAAAATTTTGATTGTTGTGAACCAAAAATTGATGCAGCAGAAGCAATACAAGTTGCATGA 2100 0.4224 MSGGEVGGGSVFVAWEEQVICQERGNRVIHFYLKDALGNSVLAVVGTERSVRHMMYVVPDHFLQAYGSTQPINACKWRARREVVDWLTCLVSRSHHAGVQLDDLVQADESLKILMPGINVSNRILPDKMISRKLKFQSSDIEWSGITWFCAKQLKHYSGFCRNGTTINVHSFVYIMAEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKQVIPQLNLQEGEVFITPHVQVISAECVNGPATVLTPKHYEKYLAAVPHTSLSEIHTCFRQFKNNRLKPFTLTKLRGYSNQPVLSCLNSPILSKRKTKCEKSHTDDDDENFTQDDPLRSINKRIRSSKDQIFEKGFSGLQVYAPTNEMTKCGLQYPSLKLKLSRKTVGIKVIGPKPKLSFQVGAKIEVLCQDSGIRGCWFRCKILSVSPRLLKVQYDNLVDIEGPQNLEEWVPASRVAATDKLGMRCSGRLTVRPCPPEYNSGRIFEIGAAVDAWWCDGWWEGVVTAVNVSGDGILQVYTPGEERFLKVEQKNIRISRDWINNRWIDIRGKADICSYLTSNVRSSIGMSANSAVVDGSLSDCSALESKSSSIPKVEVAKKVESESFGLEIPVDPENMKGITLREPLYAIHEDKDNNSGGGCDDEADKAVKTLLALNEHKDNNSCRDSDDDTEGDDNVNGDDVDNDEASEENFDCCEPKIDAAEAIQVA* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1467 699 PANTHER BROMO ADJACENT-LIKE DOMAIN PROTEIN 10 596 - -
Pvu6g1467 699 MobiDBLite consensus disorder prediction 658 681 - -
Pvu6g1467 699 MobiDBLite consensus disorder prediction 650 689 - -
Pvu6g1467 699 Pfam BAH domain 166 259 IPR001025 GO:0003682
Pvu6g1467 699 ProSiteProfiles BAH domain profile. 165 284 IPR001025 GO:0003682
Pvu6g1467 699 SMART BAH_4 165 284 IPR001025 GO:0003682
Pvu6g1467 699 Pfam Agenet domain 394 469 IPR008395 -
Pvu6g1467 699 Gene3D - 132 281 IPR043151 -
Pvu6g1467 699 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 596 - -
Pvu6g1467 699 SMART agenet_At_2 389 454 IPR014002 -
Pvu6g1467 699 SMART agenet_At_2 475 533 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1467 Pvu-Chr6 25527767 25536011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1467 403 531 PHD Transcription Factor Family AT5G58610 27.820 2.77e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1467 - - vun:114188137 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1467 6 25527767 25536011 Pvu6g1467 6 25527767 25536011 ECH