Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1464 ATGACATCCATACCTTCTAAAAACCTATGTGTTCGGAGGCAACAATGCCCTTGTGGAGATTGGAAGTGTTATATTACGTATGAGGGTGATTCTGAAGAGGGTTCTGCGGCACCTGAATTGGTGAAGGAAGAGAAAGCATCTTCTGGGGCTATGATTACTCCCTATGTTGGAATGGTTTTTAAGAGTGATGATGATGCTTTTGAGTATTATGGCAATTTTGCTAGGAAGAATGGGTTCTCTATTAGGAAGGAAAGGTCTAGAATTAGCCCCCAGTTGGGGATTTACAAGCGTGACTTCGTTTGTTACCGGTCCGGCTTTGCCCCGGTGAAGAAGAAGCCTAATGGAGAACACCATAGAGATAGGAAATCAGTGAGGTGTGGATGTGATGCGAAGATGTATCTATCCAAGGAAGTTGTAGAAGGGGTTTCCCAGTGGTTCGTTGTGCAGTTTAGTAATGTGCACAATCATGAAATTTTGGAAGATGATCAAGTGCGTCTTTTGCCCGCGTATCGTAAAATTCACGAGGCTGATCAAGAGCGTATACTCTTGCTCTCCAAGGCAGGGTTTCCAATTCATCGGATAGTGAAAATGCTTGAGCAGGAAAAGGGAATTCAAGGGGGCCATCTGCCTTTCTTGGAAAGGGATGTGAGGAACTTTGTTCAAAACCGCAAGAAGGTTGTTCTAGAGAATGAGGCATTGCTCAGTGAGAAAAGGGAAAATGATGTATTGGAACTTCTTGAGGCGTGCAAAGTGATGAAAGAAGCAGATAATGAGTTTGTGTATGATTTCACTGTGGATGGGAATGATAAGGTTGAAAATGTAGCTTGGTCATATGGCGACTCAGTTAATGCAAATGCTATGTTTGGTGATGTGGTTTATTTTGATACTTCTTATAGATCGGTCACTTATGGATTGCTTTTTGGAGTATGGTTTGGTATTGATAGCTACGGCAGAACTATTTTTTATGGTTGTGTTTTATTGCAGGATGAAACACCTCAATCCTTCTCATGGGCATTACAGACTTTTGTCAGGTTCATGAGAGGAAGATGTCCACAAACTATTCTAACTGATCTAGACCCGGGACTTAAAGATGCGATTCTAAGTGAATTTCCAGGAACTAAACATGTCGTTCCTCAATGGAATATTCTACACAAGGTACCCTGTTGGTTTTCTCCTACTCTGGGTTCTCGGTATGCAGAATTTAAATCTGAGTTCGATGCCTTATTTCACATTGAGAATACAGAGGAATTTGAACTTCAGTGGAGCCAGATGATTTCTGTGTTTGGACTTGGTTCAGATAAACATGCTGATTTACTATATACTGTCCGAGAATCCTGGGCCCAAGCCTATGTAAGAGGTTACTTTCTGGCTCGAATGGCGACAATGGCTTACTCAAAGTCTATAGATGCATTTTTGAAAAGGATTTTCTCTGCTCATACGTGTTTGCGTAGCTTCTTTGAGCAGGTTGGCATTTCTGCAAGTTTTCAACATCAAGCACTTAAGGAGACTCAATTTATTCAGCTCAAAACTTGCATACCGATTGAAGAGCATGCACGGAGTGTTCTCACTCCTTTTGCTTTTAATGCCTTGCAGCAAGAGCTGTTGCTGTCCATGCAATATGCTGCATCCGAAATGGCCAATGGATCGTATATTGTGCGGCATTTCAAAAGGATGAACGGAGAACGGCTTGTAATATGGTTGGTTGAAGATGATCAGATACACTGCTCTTGCAAGGAGTTTGAATCTTCAGGAATACTATGCAGGCATGCTCTTCGTGTATTTGTAATAAAAAACTACTTTCAGTTACCTGATAAATACTTTTTAGGTAGATGGAGACGGGAATGCTCATTACTTGTTAATGATGATGATAATAATCAAGGCATTGGAGAGGAATGGTTTCAAGAATATCAGTCCCTAGCTGAAACTTTATTTCAAGAATCATCAATTACAAAGGAGCGATCTGAGTATGTGCGTAAAGAACTGACAAAAGAACTTACTAGGATTCTTAACGAGGTTAGAAATCTCCCTGAGGCTGATGGAGTCTGCATGAACATGTTAGTCTCATCAACCAACTAG 2076 0.4109 MTSIPSKNLCVRRQQCPCGDWKCYITYEGDSEEGSAAPELVKEEKASSGAMITPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRISPQLGIYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHEILEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLEQEKGIQGGHLPFLERDVRNFVQNRKKVVLENEALLSEKRENDVLELLEACKVMKEADNEFVYDFTVDGNDKVENVAWSYGDSVNANAMFGDVVYFDTSYRSVTYGLLFGVWFGIDSYGRTIFYGCVLLQDETPQSFSWALQTFVRFMRGRCPQTILTDLDPGLKDAILSEFPGTKHVVPQWNILHKVPCWFSPTLGSRYAEFKSEFDALFHIENTEEFELQWSQMISVFGLGSDKHADLLYTVRESWAQAYVRGYFLARMATMAYSKSIDAFLKRIFSAHTCLRSFFEQVGISASFQHQALKETQFIQLKTCIPIEEHARSVLTPFAFNALQQELLLSMQYAASEMANGSYIVRHFKRMNGERLVIWLVEDDQIHCSCKEFESSGILCRHALRVFVIKNYFQLPDKYFLGRWRRECSLLVNDDDNNQGIGEEWFQEYQSLAETLFQESSITKERSEYVRKELTKELTRILNEVRNLPEADGVCMNMLVSSTN* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1464 691 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Pvu6g1464 691 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 679 - -
Pvu6g1464 691 Pfam MULE transposase domain 291 384 IPR018289 -
Pvu6g1464 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 679 IPR031052 GO:0006355
Pvu6g1464 691 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Pvu6g1464 691 SMART 26again6 573 600 IPR006564 GO:0008270
Pvu6g1464 691 Pfam SWIM zinc finger 569 594 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1464 Pvu-Chr6 25510348 25513384 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu6g1464 MULE 2.2e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1464 - - gmx:100817107 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1464 6 25510348 25513384 Pvu6g1464 6 25510348 25513384 ECH