Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1441 ATGATGAGTGAACAATTGGGACTGCTAAAAGTCATTGTTGTGCAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTGCTGAAACTAGGGAACCAGACTGCAAAGACCAAGGTAATTAACAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTTAATTTCACTCTTACAGAACCCTTGGGAGTTCTGAATTTGGAAGTGTTTGATAAAGATCTATTGAAGGCTGATGACAAGATGGGAAATGCTTTCCTCAACCTTCAACCATTAGTCTCTGCAGCCAGATTAAGGGATATCTTACGAGTGTCCTCTGGTGAGACAACCTTAAGGAAGGTCATACCTGATGTTGAAAACTGTCTTGTTCGTGAAAGCAGTATCAATTGTGTTAATGGTGAGGTGGTGCAGAATGTTTGGTTAAGGCTTCGTGGAGTAGAGTCTGGGGAACTAGAATTGATCATCAAGCTGGCCACACCTATTGCTCCTGCAACATAG 504 0.4266 MMSEQLGLLKVIVVQGKRLVIRDFKSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFLNLQPLVSAARLRDILRVSSGETTLRKVIPDVENCLVRESSINCVNGEVVQNVWLRLRGVESGELELIIKLATPIAPAT* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1441 167 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 162 IPR044562 -
Pvu6g1441 167 CDD C2_ArfGAP 6 151 - -
Pvu6g1441 167 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Pvu6g1441 167 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Pvu6g1441 167 Pfam C2 domain 8 100 IPR000008 -
Pvu6g1441 167 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 2 162 - -
Pvu6g1441 167 Gene3D C2 domain 1 117 IPR035892 -
Pvu6g1441 167 PRINTS C2 domain signature 23 35 IPR000008 -
Pvu6g1441 167 PRINTS C2 domain signature 47 60 IPR000008 -
Pvu6g1441 167 PRINTS C2 domain signature 68 76 IPR000008 -
Pvu6g1441 167 SMART C2_3c 8 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1441 Pvu-Chr6 25313402 25316408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1441 2 155 C2H2 Transcription Factor Family AT4G05330 46.753 2.87e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1441 - - gmx:100499880 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0909 3 15554102 15555507 Pvu6g1441 6 25313402 25316408 PCT