Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1433 ATGATTCCGAAATTGGTGATCCATTTCATCATTTTGGTAATATGGGAGGTATCTGCACAAGGTGAGTTACCTGTAGCAAAGCCTGGCTGTGATTCGCGATGTGGAGATGTTCCAATTCCCTTTCCCTTTGGAATGAAGAGTTCGGAGTGCTATGCAGAAAAATGGTTTGAAATAGAATGCAGAAACGCTTCCACATATACCCATTACAGTCACACACCTTACCTCAAGTCAATAGGACTGGAAGTGACATCCATTTATGTCGAAGCAGGCACAGTTACTATCAAGCATCCTATTTACCGTAGTAACTGCGGATCCAAAGATTCTCCGCCGGTCAACCAGTCGCTGGAAGGAAGCCCTTTCGTGTATTCCCAAGAACGCAACAAATTTGTGGCCGCAGGTTGTAACAGTATTGCTATTTTGAAGTTAAATGGATCAGAAGTTAGTGGTTGTGTGTCCACCTGCAACGAGAACTACAAGGTGGGTGATATCGGAAATATCGAGCTTAGAGAAAGTGATTGTAATGGGACGTCTTGCTGTGAAAGTTCCCTGCCATCGTATCTTAAAGAATACAGCATTGAAATAAAAGGTTTAAAGGAGAAAGAAAGTAGTCATGAGTGCAGTTACGCCATGGTTGTACAGCAAAATCCGTACTACAGCTACCGATACTATTCTTATAATGCTCCCAGAAGCTACTTTCCTGTGAATGGTGTGATGGAGGATTTAGATGTAGTCCCTGCGGTGCTTGAATGGGAGATTGTGAACAATTTGAACCTTACACTTCCTTTAGATCCTCTCTCTGAGTGTATTGATACTAATGTTACATCTTCACGATATAAACGTTCAGGTCAGAGATGTTACTGCTTTGGTTCCGGTAATCCCTACTTTGAGGGAGGTTGTCCAGCAGTTTATCGTCCGGAACACAGCAAATCGATAAGTGCCGTAATAAAAGGAGTTTCTCTAAGCTTCGGATCCATCATTTTACTCCTTATTTTATGGCGAGTGTTGAAGGGTACAAAAAAAACTATTGTGGAAAAATACAGAAAAAGAATGTTCAAAAGAAATGGAGGATTATTGTTACAACAAAGATTGTCCTCTGGTGAAGTTAATGTGGATAAAGTTAAACTTTTCAGCTTAAAAGAGTTGGAGAAGGCAACAGATAACTTCAACACGAATAGAGTAGTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGCTGATAAATGGAACCATTATTGCAGTGAAAAAATTTAAGATCCAAGGAAAAATAGAAGAATTCATCAATGAATTTGTCATTCTGTCACAAATTAACCACAGAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTAAAATTCCTTTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTACTTGCATCAACAAAATGAAGATTTGCCAATGACATGGGACATTCGTTTGAGAATTGCCACTGAGGTTGCTGGAGCTTTGTTTTACTTGCACTCTGCTGCTTCTCAGCCTATTTATCATAAAGATATCAAGTCAACAAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGTACATCTAGAATGATTTCCAGTGATGTTACTCACCTTACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATATTTTCAAACTAGTCAATTCACAGAAAAAAGTGACGTCTACAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGGAAAAAGCCAATAACCCACACAACTTCAGAGGAAGCCAAAAGTTTAGCTTCATATTTCATCATGTGCGTGGAGAAAGATTGTGTATTTGATATTATTGATGAAAGGGTGATGAAGGAAGGGGAGAAAAATCATATCATGGAAGTTGTCAATCTTGCAAATAGATGTTTAGAGCTTAATGGAAAGAGACGACCAACTACGAAGGAAGTCACATTAGAATTAGAAAGTATTCGAAAATTGGAAGGAAAGTCAAATGCACAAGAAAGACATAATGAACTTGTTAGAAGTGAAGACTATCAATCTTGGGATGATTATTCTACTATCTTAGAAATAAGGTCAGCTTTTGATCAAAGTAGCAGAACACCAACCTTGGAAGATATTCATATTCGTACCATATAA 2145 0.3832 MIPKLVIHFIILVIWEVSAQGELPVAKPGCDSRCGDVPIPFPFGMKSSECYAEKWFEIECRNASTYTHYSHTPYLKSIGLEVTSIYVEAGTVTIKHPIYRSNCGSKDSPPVNQSLEGSPFVYSQERNKFVAAGCNSIAILKLNGSEVSGCVSTCNENYKVGDIGNIELRESDCNGTSCCESSLPSYLKEYSIEIKGLKEKESSHECSYAMVVQQNPYYSYRYYSYNAPRSYFPVNGVMEDLDVVPAVLEWEIVNNLNLTLPLDPLSECIDTNVTSSRYKRSGQRCYCFGSGNPYFEGGCPAVYRPEHSKSISAVIKGVSLSFGSIILLLILWRVLKGTKKTIVEKYRKRMFKRNGGLLLQQRLSSGEVNVDKVKLFSLKELEKATDNFNTNRVVGKGGQATVYKGMLINGTIIAVKKFKIQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHQQNEDLPMTWDIRLRIATEVAGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISSDVTHLTTVVQGTFGYLDPEYFQTSQFTEKSDVYSFGVVLVELLTGKKPITHTTSEEAKSLASYFIMCVEKDCVFDIIDERVMKEGEKNHIMEVVNLANRCLELNGKRRPTTKEVTLELESIRKLEGKSNAQERHNELVRSEDYQSWDDYSTILEIRSAFDQSSRTPTLEDIHIRTI* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1433 714 Gene3D Phosphorylase Kinase; domain 1 360 461 - -
Pvu6g1433 714 Pfam Protein kinase domain 389 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1433 714 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 701 IPR045274 GO:0007166
Pvu6g1433 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Pvu6g1433 714 ProSiteProfiles Protein kinase domain profile. 388 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1433 714 Gene3D Transferase(Phosphotransferase) domain 1 462 684 - -
Pvu6g1433 714 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 15 701 - -
Pvu6g1433 714 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247
Pvu6g1433 714 SMART serkin_6 388 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1433 714 SUPERFAMILY Protein kinase-like (PK-like) 372 681 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1433 Pvu-Chr6 25177008 25182246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1433 2 660 Receptor kinase-like Gene Family AT1G16130 42.008 2.09e-172 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu6g1433 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1433 - - gmx:100775935 903.664