Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1431 ATGATTTTGAAATTGGTGATCCATTTCATCATTTTGGTAATGCGGGAGGTATCTGCATATCCTCCAAGAATTGGTAGGACACGTGTAGAAAAGCCTGGCTGTGAATGGCAATGTGGAGATGTTTCAATTCCCTTTCCGTTTGGAATGAAGAGTTCGAAGTGCTATGCAGGGAAATGGTTTGAAATAGAATGCAGAAACACTTCCTCCTATAACAATTACAGTCACACACCTTACCTGAAGTCAATAGGAGTGGAAGTGATATCCTTTGATCTCAGAAGAGGCCTGGTTACTATCAATCATCCTATTTACCGTAGTAACTGCGGATCCAAAGATTCTCCGCGGGTCAACCAGTCCCTGGAAGGAAGCCCTTTCGTGTATTCCCGTAAATACAACAAATTTGTGGCCGCAGGTTGTAATATTATGGCTTTTTTGCAGTTAAATGGGTCAGGTAGTGGTTGTGTCTCCATTTGTGACGAGGACTACAAGGTGGGTGACGCTAATTGTAATGGGAAGTCATGCTGTGAGAGTTCCCTGCCACTGTACCTTACACAATACAGCACTGTAATAAAAGCTTTAAAGGATAATGAAACGAGTCATGGGTGCAGTTACGCCATGGTTGTAGAGAAAGTTCTGAGCTACCGCTACTACTTTCCTGTGAATGGTGTGATGAAGGATTTAGCTGTGGTCCCTGCAGTGCTCGAATGGGAGATTGTGAACAGTTTGAACCTTACACTCCCTTTAGATCATCTCTCCTACTGTGATGATACTAATGTTACATCTTCACTATATAAACGTTCAGGTCAGAGATGTTCCTGCCGATTCACTTTCGGTAATCCTTACTTTGTCGGAGGTTGTAAAGATGATCCTCCTCCGATATACAGGAAATCGAGAAGTTCCGTAACAATATCCATCATAAAAGGAGTTTCTATAAGCTTCGGATCCATCATTTTACTCATTATTTTATGGCGAGTGTTGAAGGCTACAAAAAAAACTATAGTGGGAAAATACAGAAAAAGAATCTTCAAAAGAAATGGAGGATTATTGTTAAAACAAAGATTGTCTTCTGGTGAAGTTAATGGGGATAAAGTTAAACTTTTCAGCTTAAAGGAGTTGGAGAAGGCTACCGATAACTTCAACACGAATAGAGTAATTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATTAATGGAATAATTATTGCAGTGAAAAAATTTAAGGTCCAAGGTAAAATAGAAGAATTCATCAATGAATTTGTCATTTTGTCACAAATTAACCACAGAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTAAAATTCCTTTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTACTTGCATCAACAAAATGAAGATTTGCCAATGACATGGGACATTCGTTTGAGAATTGCCACTGAGGTTGCTGGAGCTTTGTTTTACTTGCACTCTGCTGCTTCTCAGCCTATTTATCATAAAGATATCAAGTCAACAAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGTACATCTAGAATGATTTCCAGTGATGTTACTCACCTTACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATATTTTCAAACTAGTCAATTCACAGAAAAAAGTGACGTCTACAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGGAAAAAGCCAATAACCCACACAAGTTCAGAGGAAGCCAAAAGTTTAGCTTCATATTTCATCATGTGCGTGGAGAAAGATTGTGTATTTGATATTATTGATGAAAGGGTGATGAAGGAAGGGGAGAAAAATCATATCATGGAAGTTGTCAATCTTGCAAATAGATGTTTAGAGCTGAATGGAAAGAGACGACCAACTATGAAGGAAGTCACATTAGAATTAGAAAGTATTCGAAAATTGGAAGGAAAGTCAAATGCACAAGAAAGACATAATGAACTTGTTAGAAGTGAAGACTATCAATCTTGGGATGATTACTCTACTATCTTAGAAATAAGGTCAGCTTTTGATCTAAGTAACAGAACACCAAACTTGGAAGATATTCATATTCGTACCATATAA 2115 0.3801 MILKLVIHFIILVMREVSAYPPRIGRTRVEKPGCEWQCGDVSIPFPFGMKSSKCYAGKWFEIECRNTSSYNNYSHTPYLKSIGVEVISFDLRRGLVTINHPIYRSNCGSKDSPRVNQSLEGSPFVYSRKYNKFVAAGCNIMAFLQLNGSGSGCVSICDEDYKVGDANCNGKSCCESSLPLYLTQYSTVIKALKDNETSHGCSYAMVVEKVLSYRYYFPVNGVMKDLAVVPAVLEWEIVNSLNLTLPLDHLSYCDDTNVTSSLYKRSGQRCSCRFTFGNPYFVGGCKDDPPPIYRKSRSSVTISIIKGVSISFGSIILLIILWRVLKATKKTIVGKYRKRIFKRNGGLLLKQRLSSGEVNGDKVKLFSLKELEKATDNFNTNRVIGKGGQATVYKGMLINGIIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHQQNEDLPMTWDIRLRIATEVAGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISSDVTHLTTVVQGTFGYLDPEYFQTSQFTEKSDVYSFGVVLVELLTGKKPITHTSSEEAKSLASYFIMCVEKDCVFDIIDERVMKEGEKNHIMEVVNLANRCLELNGKRRPTMKEVTLELESIRKLEGKSNAQERHNELVRSEDYQSWDDYSTILEIRSAFDLSNRTPNLEDIHIRTI* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1431 704 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 29 666 - -
Pvu6g1431 704 Pfam Protein kinase domain 379 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1431 704 Gene3D Phosphorylase Kinase; domain 1 350 451 - -
Pvu6g1431 704 Gene3D Transferase(Phosphotransferase) domain 1 452 674 - -
Pvu6g1431 704 SUPERFAMILY Protein kinase-like (PK-like) 363 654 IPR011009 -
Pvu6g1431 704 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 666 IPR045274 GO:0007166
Pvu6g1431 704 SMART serkin_6 378 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1431 704 Pfam Wall-associated receptor kinase galacturonan-binding 34 92 IPR025287 GO:0030247
Pvu6g1431 704 ProSiteProfiles Protein kinase domain profile. 378 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1431 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1431 Pvu-Chr6 25161338 25166109 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1431 34 664 Receptor kinase-like Gene Family AT1G16260 42.530 5.54e-169 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu6g1431 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1431 - - gmx:100775935 893.649