Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1429 ATGTTCAAAAGAAATGGAGGATTATTGTTACGACAAAAATTGTCTTCTGGTGAAGTTAATGGGGATAAAGTTAAACTTTTCAGCTTAAACGAGTTGGAGAAGGCTACCGATAACTTCAACACGAATAGAGTAGTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATTAATGGAACAATTATTGCAGTGAAAAAATTTAAGGTCCAAGGAAAAATAGAAGAATTCATCAATGAATTTGTCATTCTGTCACAAATTAACCACAGAAACGTGGTCAAGTTGTTAGGAAGTTGTTTGGAGACTGAAATTCCTTTACTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTACTTGCATCAACAAAATGAGGATTTTCCTATGACATGGGACATGCGTTTGAGAATTGCCACTGAAGTTGCTGGAGCTTTGTTTTACTTGCACTCTGGTGCTTCTCAGCCTATTTATCATAAAGATATCAAGTCAACAAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGTACATCTAGAATGATTTCCAGTGATGTTACTCACCTTACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATATTTTCAAACAAGTCAATTCACAGAAAAAAGTGACGTCTATAGCTTCGGAGTAGTTCTTGTTGAACTCTTAACCGGGAAAAGGCCAATAACCCTCACAAGTTCAGAGGAAGCCAAAAGTTTAGCTTCATATTTCATCATGTGTGTGGAGCAAGATTGTGTATTTGATATTATTGATGAAAGAGTGATGAAGGAAGGGGAGAAAAATCATATCATGGAAGTCGTCAATCTTGCAAATAGATGTTTAGAGCTGAATGGAAAAAGACGACCAACTGCGAAGGAAGTCACATTAGAATTAGAAAGTATTCGAAAATTGGAAGGAAAGTCAAATGCACAAGAAAGACATAATGAACTTGTTAGAAGTGAAGACTATCAATCTTGGGATGATTATTCTACTATCTTAGAAATAAGGTCAGCCTTTGATCTAAGTTGCAGAACACCAACCTTGGAAGATATTCATATTCGTACCATATAA 1098 0.3552 MFKRNGGLLLRQKLSSGEVNGDKVKLFSLNELEKATDNFNTNRVVGKGGQATVYKGMLINGTIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETEIPLLVYEFIPNGNLFEYLHQQNEDFPMTWDMRLRIATEVAGALFYLHSGASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISSDVTHLTTVVQGTFGYLDPEYFQTSQFTEKSDVYSFGVVLVELLTGKRPITLTSSEEAKSLASYFIMCVEQDCVFDIIDERVMKEGEKNHIMEVVNLANRCLELNGKRRPTAKEVTLELESIRKLEGKSNAQERHNELVRSEDYQSWDDYSTILEIRSAFDLSCRTPTLEDIHIRTI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1429 365 Gene3D Transferase(Phosphotransferase) domain 1 113 336 - -
Pvu6g1429 365 PANTHER - 2 333 - -
Pvu6g1429 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Pvu6g1429 365 SMART serkin_6 39 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1429 365 SUPERFAMILY Protein kinase-like (PK-like) 24 317 IPR011009 -
Pvu6g1429 365 Pfam Protein kinase domain 40 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1429 365 ProSiteProfiles Protein kinase domain profile. 39 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1429 365 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 333 IPR045274 GO:0007166
Pvu6g1429 365 Gene3D Phosphorylase Kinase; domain 1 11 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1429 Pvu-Chr6 25150972 25152069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1429 1 311 Receptor kinase-like Gene Family AT1G79670 63.259 4.31e-142 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu6g1429 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1429 - - vun:114188578 619.387