Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1424 ATGTCTGAAACCTTAACTCAGACCTTGCACCCTTCAGATGAAGCTGTGTCCCTGAAGGTGGAGGACAACTACCGTGGAAGAAGCAGCAGCGTGAGTGAGATAGAGGAAGATAACTCCTCAGACTTCCTCTTCAACAATCATGCTCCTAAACCTATGGTTACCATTGGTGAAGACGAGAAGGAGGAGGAAGACACTGTCTATGTGGCCGTGGGAAAGAGCCAGAGTAGCATCGAAGCCTTGTCATGGACCCTAAACAACTTCACCACTCCATCGACCATGCTCTATCTCATACACGTTTTCCCAGAGATCCACCTCCTTCCAAATCCCTTGGGAGTGGGAATGATTCCAAAGAACCAAGCGAGTCCTGAGCAGGTAGAGAGCTACATGGCCCAAAAAAGAGGCAAGAGAAGAGAGCTCCTCAACAAATTCCTCCAATTATGTTCTGCTTCCAAGGTTAAGGTGGACACCATCTTGATTGAGAGTGACTTGATTGCAAAGGCTATCAATGACCTGATTCCTATTCTTCAAATAAGAAAACTAGTGATTGGAGCCAGCAAATCCCAAATAAGAAAAATGAGATCAAGGAAAGGGAGTGGCATAGCTGATCAGATACTGCAGAATGCTCCAGAAGGTTGCGATGTGAGTATTGTATGTGAAGGAAAGGAAGTAAATGAACAGATAGCTGGTGCCATTGCCACTGATACTTCCATGTCCCAGAAAAACAAGCATCAGCAAAATGCTTCTGTTTCATGTGTTTGTTTCAACTTTTAA 771 0.4475 MSETLTQTLHPSDEAVSLKVEDNYRGRSSSVSEIEEDNSSDFLFNNHAPKPMVTIGEDEKEEEDTVYVAVGKSQSSIEALSWTLNNFTTPSTMLYLIHVFPEIHLLPNPLGVGMIPKNQASPEQVESYMAQKRGKRRELLNKFLQLCSASKVKVDTILIESDLIAKAINDLIPILQIRKLVIGASKSQIRKMRSRKGSGIADQILQNAPEGCDVSIVCEGKEVNEQIAGAIATDTSMSQKNKHQQNASVSCVCFNF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1424 256 CDD STK_N 65 220 - -
Pvu6g1424 256 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 15 255 - -
Pvu6g1424 256 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 15 255 - -
Pvu6g1424 256 Gene3D HUPs 64 217 IPR014729 -
Pvu6g1424 256 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1424 Pvu-Chr6 25105356 25107271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1424 69 221 Plant U-box Gene Family AT5G57035 30.719 1.42e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1424 - - gmx:100781056 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0913 3 15595009 15596336 Pvu6g1424 6 25105356 25107271 PCT