Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1423 ATGGACTCAAAAACTAGTTCTAGATCTCTCCCAAAACACCATCAGAAGACGGCTGGAATTCAAACCCTTGAGGTAAAAGACAACCGGTCTTCAGGGAATCCAGCTTCCCTGAAAACAGGGAAAACTGAGCTGGCTGGTCCAGAGGATTTATCCAAGTCTGTAGGGAGCGTGTCCAAGCAGAATACTGAGGAAACTGCTGAAAACAAGAAGTTAGGAGTTTCAATCCAAAAGGGGTCTGCTGATTCCTTGTGCAATAAAAGTAGTTCTGGTGCTTCTTCATCTGTTTTCGACAAGGCTGATCAAGCTGTTAATGAGAAAATAGGCTCACAGGAAAGCTCTATTGAACAAGACAAAAAGACATCGGAATATGGAAGTGTGAAAAATAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCCAGCAGTCTTGCAAAGACAAGTGGAAGTGCCAAGATTAGTGACAGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTACAGAGGAAGCACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCATAAACAAACCTCACAAGGCAAATGACTTGAGATGGGAAGCCATTCAAGCAGTTCGCAGTAGAGATGGGGCTTTGGGTTTAGGTCACTTTAGACTACTGAAGAGGCTGGGTTGTGGGGATATAGGCAGTGTTTATCTCTCTGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCTCTAGCGAGTCGCAAAAAACTACTTCGAGCCCAGACAGAACGAGAAATCCTGCAGTCTCTTGACCACCCATTTCTCCCAACTTTGTACACTCATTTTGAGACTGAGAAATTCTCATGTTTGGTAATGGAATTCTGCCCAGGTGGTGACCTCCATACTCTTAGACAGAAGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAATTTTATGTAGCAGAGGTCCTTCTGGCATTAGAGTACCTCCACATGCTCGGGATTGTCTACCGTGACCTTAAGCCAGAAAATGTCCTTGTTAGGGACGACGGACATATTATGCTCTCTGACTTTGATCTTTCCCTCCGATGTGCCGTCAGTCCGACCCTTGTGAAAACTTCAAACACGGATTCTGAGCCTTTAAGAAAGAACTCTGCTTACTGTGTCCAACCTGCATGTATTGAGCCACCTTCCTGCATCCAACCATCCTGTGTTGCCCCTACCACATGCTTTTCACCCCGGCTCTTCTCTAGCAAATCAAAGAAAGACCGGAAGGCGAAAACTGAAATTGGTAACCAAGTGAGTCCATTACCTGAGCTGATTGCAGAGCCTACTGATGCTCGGTCCATGTCATTTGTTGGAACTCATGAATACTTGGCACCTGAGATTATTAAGGGAGAAGGTCATGGGAGTGCAGTTGATTGGTGGACCTTTGGGATCTTTCTATACGAGCTGTTGTTTGGTAAAACTCCCTTCAAAGGATCCGGTAACCGAGCCACACTGTTTAACGTTGTTGGACAGCCGCTGCGATTTCCAGAAGCACCTGTTGTGAGTTTTGCAGCAAGGGATCTTATAAGGGGGTTGCTTGTGAAAGAACCTCAGCACAGATTGGCATATAAAAGAGGGGCAACTGAGATCAAGCAACACCCCTTTTTTGAAGGTGTGAACTGGGCATTGATCAGATGTGCTACCCCACCTGAGATCCCAAAGACTGTAGAGTTTGAGAAGATACCCTCCCCAGCCTCATCAGGTGCTGGTGAAAAGGCTGTTAACCACATGTCAATAGCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1839 0.4502 MDSKTSSRSLPKHHQKTAGIQTLEVKDNRSSGNPASLKTGKTELAGPEDLSKSVGSVSKQNTEETAENKKLGVSIQKGSADSLCNKSSSGASSSVFDKADQAVNEKIGSQESSIEQDKKTSEYGSVKNSSVSAKVSDGASSLAKTSGSAKISDRADFVESGKSSIYRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRSRDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSNTDSEPLRKNSAYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKAKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKTVEFEKIPSPASSGAGEKAVNHMSIANQKGSDNYLEFDFF* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1423 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Pvu6g1423 612 Pfam Protein kinase domain 217 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1423 612 Pfam Protein kinase domain 451 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1423 612 MobiDBLite consensus disorder prediction 1 130 - -
Pvu6g1423 612 PANTHER FLIPPASE KINASE 1-RELATED 3 612 - -
Pvu6g1423 612 CDD STKc_phototropin_like 215 572 - -
Pvu6g1423 612 MobiDBLite consensus disorder prediction 78 110 - -
Pvu6g1423 612 MobiDBLite consensus disorder prediction 12 38 - -
Pvu6g1423 612 Gene3D Phosphorylase Kinase; domain 1 214 299 - -
Pvu6g1423 612 ProSiteProfiles Protein kinase domain profile. 216 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1423 612 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 612 - -
Pvu6g1423 612 Gene3D Transferase(Phosphotransferase) domain 1 300 375 - -
Pvu6g1423 612 SUPERFAMILY Protein kinase-like (PK-like) 192 575 IPR011009 -
Pvu6g1423 612 SMART serkin_6 216 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1423 612 Gene3D Transferase(Phosphotransferase) domain 1 448 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1423 Pvu-Chr6 25095928 25100240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1423 24 612 AGC Kinase Gene Family AT5G47750 75.593 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu6g1423 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1423 K08286 - gmx:100798088 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1423 6 25095928 25100240 Pvu6g1423 6 25095928 25100240 ECH