Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1405 ATGTATCATTCAAAGAATGTTCCTAGTGCAAGTTTAGTTGGAGGTAATTCATTAGTTCATGGTCAGCACATAGATTGTGGTGGCAGCGCAATGGATCATGGCAATGGAGGAAACAGTCATAGTAACAACTCTAATCTCAACTCAAAACAACGTTTACGGTGGACACATGAATTACATGAGCGCTTCGTTGATGCTGTGGCTCAACTTGGTGGGCCAGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTGACCATTTACCATGTCAAAAGCCATTTACAGAAGTACCGACTAGCAAAATATTTACCGGATTCCTCATCTGATGAAGGGAAAAAGGCTGACAAGAAAGAAACTGGGGATGTGCTTTCGAATCTCGATGGTTCATC 401 0.4339 MYHSKNVPSASLVGGNSLVHGQHIDCGGSAMDHGNGGNSHSNNSNLNSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDVLSNLDGS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1405 133 MobiDBLite consensus disorder prediction 107 126 - -
Pvu6g1405 133 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 133 IPR044848 GO:0003700
Pvu6g1405 133 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 133 - -
Pvu6g1405 133 Gene3D - 48 107 - -
Pvu6g1405 133 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Pvu6g1405 133 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Pvu6g1405 133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Pvu6g1405 133 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Pvu6g1405 133 MobiDBLite consensus disorder prediction 107 133 - -
Pvu6g1405 133 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1405 Pvu-Chr6 24924189 24926892 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1405 28 124 G2-like Transcription Factor Family AT4G13640 52.885 5.39e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu6g1405 Myb_DNA-binding 4.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1405 - - pvu:PHAVU_006G1347000 263.077