Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1391 ATGGGTGAAACAGTTTCACTATTCCTACTACTATTTTTCACTCATTTGTTCATTGGACATGCAAATACAGCAACTCAGGATTACACTGCTCTGCTGACTCTAATGGCTGCATGGGAGAACACTCCACCTAATTGGGTGGGTTCAGATCCTTGCGGTGGTTGGGATGGCATCGAGTGTACAAATTCACGCATTACCTCCATATCATTAGCAAGCATGGATTTGTCTGGTCAGCTTACTTCAGATATTGGATTACTCTCTGAACTCCTGATCTTGGATCTGTCTTACAATAGGAATTTAACTGGACCACTTCCCAGTAACATTGGAAACTTGAGAAAGCTGAGAAACTTACTTCTTATTAGTTGTGGTTTCACTGGTCCTATCCCAGCTACAATTGGAAATCTGGAACGGCTAGTCTTTCTATCTTTAAATTCCAATAGATTCTCAGGGCCAATTCCAGCTGCCATTGGTAATCTCTCAAATTTGTATTGGCTAGACTTAGCTGAAAACCAGCTTGAGGGCCCCATCCCCATATCCAATGGAACTACTCCTGGTCTTGATATGATGCACCATACCAAACACTTTCATTTTGGTAGGAATAAGCTTTCAGGAGACATACCTGCTCAACTTTTTAGCTCAGAAATGTCTCTCATTCATGTGCTTTTTGAAACCAACCGATTTACTGGAAGCATTCCATCTACACTTGGCCTTGTCAAGTCTCTGGAGGTGGTTCGCTTTGATGACAACTTTTTCAGTGGATCTTTGCCTCAGAACATCAGCAATCTTACAAGTGTTAGGGAACTGTTCCTGTCCAAAAATCGCCTGTCTGGTTCCCTCCCCGACCTTACCGGAATGAATTCCCTCAGTTACCTAGATGTGAGCAATAACAGTTTTGATCCATCAAACTTTCCATCGTGGTTGTCAACTCTCTCAGCTTTGACGACAATAATGATGGAAGATACAAAACTTGAAGGAGCTATTCCTGTTTCTTTGTTCAACCTACAGCAACTGCAGACAGTGGTGCTGAAAAACAACAAGCTAAATGGCACTTTAGATATTGGCACATTCATCAGCAACCAACTGGACCTCCTCGATTTGCAGCTTAATTATATTGAAAAGTTTGAAGCAAAAATCGATGTATCTAAAGTGGAGATAATACTTTTGAATAATCCAATTTGCCAAGAGACAGGAGTTCCACAGAGTTATTGTTCCATAACAACATCTAATGACTCATATTCAACGCCACCAGAAAACTGTGTACCTGTTCCCTGCAGCTCAGATCAGACATTAAGCCCCAAATGCAAATGTGCATACCCATATACAGGAACTTTATTTCTCAGAGCTCCTTCCTTCTCAGACTTGGGAAACCAGACTGTCTTTGTAACCCTGCAGTTAACTCTAATGCAGTCTTTTCAAGTTCATAATAAACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGAAAAACATATATCAGTACCTTGAATTGACTTTAAAATTATTTCCATCTGGCCAAGATCGTTTCAATCGAACTGGCATTTCCAGTATAGCCTTTCTTCTCAGCAACCAAACATACAAGCCTCCTTCAATGTTTGGACCATATTATTTTATTGCTGATGACTATGAAAACTATATGAATGACACAGTATTAGAAGGTCCTGTGACAACATCCAGTAAATCTTCAAATACTGGCATCATAGCTGGAGCTGCGGCTGGAGGTGCTGCCCTGTTGGTTTTGGTACTTGTTCTATTTGTGTATGCTCTCCACCGGAAGAATAAGTCAGTAAGAGCAACTGGAAAAAACAATCCTTTTGAACAATGGGATCCAGATGAGAGTAATAGTAGCATTCCACAGTTGAAAGGAGCAAGGCGCTTCAATTTTGAAGAGATACAAATCTGCACCAAAAACTTCTCACAAGTCAATAATATAGGATCTGGCGGTTATGGGAAGGTTTATCGGGGAACACTTCCCAACGGGCAACTAATCGCAGTCAAGCGAGCTCAGAAGGAATCTATGCAGGGAGGGTTAGAGTTTAAAACCGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTTATCGGTTTCTGCTTTGATCAAGGAGAACAAATGCTGATTTATGAGTACGTTGCAAATGGTACTTTGAAGGACACTCTTTCAGGGAAATCTGGAATTAGATTAGATTGGATTAGAAGGTTGAAAATAGCCCTTGGTGCTGCCAGGGGTCTGGACTATCTGCATGAACTTGCCAATCCTCCAATCATACACAGGGACATCAAATCCACTAACATATTACTGGATGAACGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAACCTTTAGGTGATGGTGCAAAAGGTTATATCACCACACAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTACAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAGGCCAATAGAGCGAGGGAAGTATATTGTGAAAGTGGTCAAGGAAGCTATAGACAAGACAAAAGGCTTCTGTGGTCTTGAGGAAGTTCTCGATCCAACTATTGATTTCGGGACAGCACTGAATGGTTTTGAGAAGTTTGTGGATATCGCCTTGCAGTGTGTTGAAGAGTCAAGTTCTGACAGGCCTACAATGAATTATGTGGTAAAAGAAATTGAGAACATGTTGCAGTTGGCTGGTTCAAGCCCCATTTTATCAGCATCAGCTTCAACTTCATCTAGTTATAACAATCCAATGAAGAGTTCCCTCCATCCTTACGAGAATGAATACTTTGATTCAAGTGTCGTCCTTCCACGTCCGTAG 2862 0.4109 MGETVSLFLLLFFTHLFIGHANTATQDYTALLTLMAAWENTPPNWVGSDPCGGWDGIECTNSRITSISLASMDLSGQLTSDIGLLSELLILDLSYNRNLTGPLPSNIGNLRKLRNLLLISCGFTGPIPATIGNLERLVFLSLNSNRFSGPIPAAIGNLSNLYWLDLAENQLEGPIPISNGTTPGLDMMHHTKHFHFGRNKLSGDIPAQLFSSEMSLIHVLFETNRFTGSIPSTLGLVKSLEVVRFDDNFFSGSLPQNISNLTSVRELFLSKNRLSGSLPDLTGMNSLSYLDVSNNSFDPSNFPSWLSTLSALTTIMMEDTKLEGAIPVSLFNLQQLQTVVLKNNKLNGTLDIGTFISNQLDLLDLQLNYIEKFEAKIDVSKVEIILLNNPICQETGVPQSYCSITTSNDSYSTPPENCVPVPCSSDQTLSPKCKCAYPYTGTLFLRAPSFSDLGNQTVFVTLQLTLMQSFQVHNKPVDSVSLSNPRKNIYQYLELTLKLFPSGQDRFNRTGISSIAFLLSNQTYKPPSMFGPYYFIADDYENYMNDTVLEGPVTTSSKSSNTGIIAGAAAGGAALLVLVLVLFVYALHRKNKSVRATGKNNPFEQWDPDESNSSIPQLKGARRFNFEEIQICTKNFSQVNNIGSGGYGKVYRGTLPNGQLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLIGFCFDQGEQMLIYEYVANGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLGDGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVVKEAIDKTKGFCGLEEVLDPTIDFGTALNGFEKFVDIALQCVEESSSDRPTMNYVVKEIENMLQLAGSSPILSASASTSSSYNNPMKSSLHPYENEYFDSSVVLPRP* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1391 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
Pvu6g1391 953 Gene3D Transferase(Phosphotransferase) domain 1 712 917 - -
Pvu6g1391 953 ProSitePatterns Protein kinases ATP-binding region signature. 642 664 IPR017441 GO:0005524
Pvu6g1391 953 PANTHER - 7 934 - -
Pvu6g1391 953 SUPERFAMILY Protein kinase-like (PK-like) 622 934 IPR011009 -
Pvu6g1391 953 CDD STKc_IRAK 642 908 - -
Pvu6g1391 953 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 934 - -
Pvu6g1391 953 Gene3D Phosphorylase Kinase; domain 1 607 711 - -
Pvu6g1391 953 Gene3D Ribonuclease Inhibitor 185 395 IPR032675 -
Pvu6g1391 953 Gene3D Ribonuclease Inhibitor 24 183 IPR032675 -
Pvu6g1391 953 SMART serkin_6 636 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1391 953 SUPERFAMILY L domain-like 58 389 - -
Pvu6g1391 953 ProSiteProfiles Protein kinase domain profile. 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1391 953 Pfam Protein kinase domain 637 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1391 Pvu-Chr6 24799563 24806621 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1391 5 951 Receptor kinase-like Gene Family AT5G49760 57.248 0.0 1024
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu6g1391 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1391 - - gmx:100782366 1575.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0936 3 17854044 17855037 Pvu6g1391 6 24799563 24806621 PCT