Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1389 ATGGGTGAAAGAATACTGATACCACTGTTGCTTTCCTTCAACTGTTTGTTGCTTGCAGTGGCACAAGATATTACCAAAGATTTTCAAGTCCTGAAGTCTCTAAGTGATTCTTGGCAAGGCCAAATTCCTAACTGGGAGGGTTCAGATCCTTGCCAAGATTGGTATGGCATTAACTGCAGAAACTCACGTGTTGTTTCCATATCATTAACAGATATTGGTTTGACCGGCAAGCTTTCTGGAGATATTGGATCACTTTCTGAATTGGATAGTCTGGATCTCTCATATAATAGGGGCCTAACAGGACCACTTCCACAAGAAATTGGAAACTTGAAGAAGCTAACGAAATTAACTCTTGTTGGTTGTGGTTTTACTGGTCGTATTCCAGATGAAATAGGATCTCTACAACACCTTGAATTCTTATCTTTAAACAGCAACAATTTTGCTGGACCAATTCCACCTTCTATTGGAAATCTCTCAAATCTTACTTGGCTAGATTTAGCTGACAATCAGCTTGATGGATCCATCCCAGTATCTAGTGGCACTACCCCTGGTCTTGATATGTTACACAAAGCATTGCACTTTCATCTTGGGCAGAATAAACTTTCAGGGCAAATTCCTCCGAAACTGTTTAGCTCAAAAATGACTCTGATACATGTGATTTTTGGCAGCAATCAACTGGTTGGCAGCATTCCGGAAACTCTTGGGCTAGTTACGAGTTTGACATTGGTGCGCTTTGAAAATAATTCACTGGATGGATATGTCCCTCTGAGCCTCAACAACCTTATCAACGTCACAGACCTGTTGTTGTCCAACAATAAGCTGCATGGTGCCCTGCCAAACCTTACTGGGATGAACTCCCTAAAATACTTGGATCTGAGCAACAATGGCTTTGATAAGTCAAGCTTTCCACTGTGGCTTTCGAATCTGAAGAATTTAACAACATTACAAATGGGGAATTTGTACCTGGATGGAACCATTCCGAATCTTTTATTTAGCATTGCCAATTTACAGAATGTTGTGCTGAAAGACAACCACCTTGGTGGAACCTTGGATATTGGCACCAACTATAGCAAACAACTGCAACTTATTGATTTAACTTCAAATTCAATTGAGGACTTCAAGCAACGAAATGATCCCCCACAAATCAGGATAATACTCGCATACAACCCGATTTGCACAGAAACAGGACTTATGGAGGATTACTGCACCAACCTCAATATCTCCCATACAAAACCACAAAATAACTGTCAACAAGGTAGCTGCAGCCCAGATCAGATTCTCAGCCCCAAATGCAAATGTGGATATCCATATACAGGAACTTTGACTTGCAGAGCCCCTTCCTATTTTGAATGGAGAAATACAACACTCCTGGAGGAACATCTAATGCAAGAATTTCAATCTGATAATCTACCTGTGGATTCAGTTTCTTTAACCCTTTCACCTAATGATCCATTTCAAAGTTTTGAGTTTTCTGTACAAATTTTCCCACTAGGCCAAACTCATTTCAGCCAACAAAACAAATCCAGAATAAGCTTCTTGCTTGGCAAACTAAGTGCTAATAGTGCATTTAATTTTATTACTGGAAACCATGATGATGGACCTAACCAGACGAGTAATTCATCAATCACTGCAATAATTATTGGAGTAGCAATTGGAGGTTCTTCTCTTCTGCTAGTGTTATTAGCCCTGGCAGGTTTTTATGCTTTCCGCCAGAGGAGAAGAGCAGAAAGAGCAATATCTCGAAGCAATCCTTTCGGAAACTGGGATCCAAGTAAAAGCAACTGCGGCACCCCTCAGTTAAAAGCACCAAAGCAGTTCTCGTTTGAGGAAATTAAGAAATACACAAACAACTTCTCACAAGCCAATGATATTGGATCAGGGGGTTATGGGAAGGTTTACCGGGGAACTCTTCCCACTGGGCAAGTGGTAGCCATAAAGCGAGCTCAAAAGGAATCAAAGCAGGGAGCGCAAGAATTCAAAGCTGAAATTGAACTCCTTTCACGGGTCCACCACAAAAATTTGGCTAGCCTTGTGGGATTCTGCTTTGAACGAGAAGAACAAATGCTGGTTTACGAGTTTATTCCTAATGGAACTTTGAAGGATGCTCTCAAATGGAAATGTGAACTTGCGTTGAGCTGGAGCAGAAGGCTGAAAGTAGCCCTTGGTGCTGCCAGGGGTTTGGCTTATCTTCACGAACATGCCGATCCCCCTATTATACACAGGGACATCAAGTCAAACAACATTTTGCTAGATAAAAACTATAATGCTAAAGTTTCTGATTTCGGTCTCTCCAAGTCTATCTTAGATGATGATAAAGATCATGTTACCACTCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGATTATTATACTAGTCAGCGGTTGACCGAAAAGAGTGATGTCTACAGTTTTGGAGTGCTAATGCTGGAGCTAATTACTGCAAAAAAGCCAATAGAACGAGGGAAATACATTGTGAAAGTGGTCAGAAATACAATAGACAAGACAAAGGACTTGTATGGTCTTCACGAAATTATTGATCCATCCATTTGTTCAGGATCAACACTAGAGGGTTTTGAGAATTTTGTGGACCTTGCAATGGAGTGTCTTAAAGAGTCAGGAGTGGACAGGCCCACAATGAGTGAAGTGGTTACAGAAATTGAAGACATGTTGCGATCTGTTGGTTTGAACCTAACATCTGAATCAGTAGCATCCACTTCATCCAGTCATAGATTTGAGGTAAGTATAGTGAGTTCCCAACAAGACCACCCTTATAGCAATGAATTTGTTGGTTCAAGTGCAGAACGTTTATATTCAAAAAGTGAGCCTAGTTAA 2835 0.4074 MGERILIPLLLSFNCLLLAVAQDITKDFQVLKSLSDSWQGQIPNWEGSDPCQDWYGINCRNSRVVSISLTDIGLTGKLSGDIGSLSELDSLDLSYNRGLTGPLPQEIGNLKKLTKLTLVGCGFTGRIPDEIGSLQHLEFLSLNSNNFAGPIPPSIGNLSNLTWLDLADNQLDGSIPVSSGTTPGLDMLHKALHFHLGQNKLSGQIPPKLFSSKMTLIHVIFGSNQLVGSIPETLGLVTSLTLVRFENNSLDGYVPLSLNNLINVTDLLLSNNKLHGALPNLTGMNSLKYLDLSNNGFDKSSFPLWLSNLKNLTTLQMGNLYLDGTIPNLLFSIANLQNVVLKDNHLGGTLDIGTNYSKQLQLIDLTSNSIEDFKQRNDPPQIRIILAYNPICTETGLMEDYCTNLNISHTKPQNNCQQGSCSPDQILSPKCKCGYPYTGTLTCRAPSYFEWRNTTLLEEHLMQEFQSDNLPVDSVSLTLSPNDPFQSFEFSVQIFPLGQTHFSQQNKSRISFLLGKLSANSAFNFITGNHDDGPNQTSNSSITAIIIGVAIGGSSLLLVLLALAGFYAFRQRRRAERAISRSNPFGNWDPSKSNCGTPQLKAPKQFSFEEIKKYTNNFSQANDIGSGGYGKVYRGTLPTGQVVAIKRAQKESKQGAQEFKAEIELLSRVHHKNLASLVGFCFEREEQMLVYEFIPNGTLKDALKWKCELALSWSRRLKVALGAARGLAYLHEHADPPIIHRDIKSNNILLDKNYNAKVSDFGLSKSILDDDKDHVTTQVKGTMGYLDPDYYTSQRLTEKSDVYSFGVLMLELITAKKPIERGKYIVKVVRNTIDKTKDLYGLHEIIDPSICSGSTLEGFENFVDLAMECLKESGVDRPTMSEVVTEIEDMLRSVGLNLTSESVASTSSSHRFEVSIVSSQQDHPYSNEFVGSSAERLYSKSEPS* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1389 944 Pfam Protein tyrosine and serine/threonine kinase 621 886 IPR001245 GO:0004672|GO:0006468
Pvu6g1389 944 Gene3D Ribonuclease Inhibitor 185 415 IPR032675 -
Pvu6g1389 944 Gene3D Ribonuclease Inhibitor 16 182 IPR032675 -
Pvu6g1389 944 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 929 - -
Pvu6g1389 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Pvu6g1389 944 CDD STKc_IRAK 624 890 - -
Pvu6g1389 944 ProSiteProfiles Protein kinase domain profile. 618 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1389 944 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Pvu6g1389 944 SUPERFAMILY Protein kinase-like (PK-like) 604 916 IPR011009 -
Pvu6g1389 944 Gene3D Phosphorylase Kinase; domain 1 590 693 - -
Pvu6g1389 944 Gene3D Transferase(Phosphotransferase) domain 1 694 907 - -
Pvu6g1389 944 SUPERFAMILY L domain-like 31 405 - -
Pvu6g1389 944 SMART serkin_6 618 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1389 944 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1389 Pvu-Chr6 24784937 24791041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1389 2 943 Receptor kinase-like Gene Family AT5G49760 50.731 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu6g1389 PK_Tyr_Ser-Thr 8.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1389 - - gmx:100810323 1410.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0937 3 17860493 17866738 Pvu6g1389 6 24784937 24791041 PCT