Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1387 ATGGCCAACGAAAACCCTGGCGATGAGGTTGTGTGCGTGACCGGCGCCAACGGTTTCATCGGTTCGTGGCTGGTTCGAACCCTCTTGGAGAACCAAAACCATACCTACACCATCCACGCCGCCGTCTTCCCCGGCTCCGACGCCTCTCATCTCTTCACCCTCCATCCCAACGCCGCCTCCCGCATCACCGTCTTCCCTGCCGACCTCCTCGACGCTGCCTCCATCTTCCGCGCCGTCGCCGGATGCTCCGGCGTCTTCCACGTGGCGTCCCCCTGCACGCTGGAGGACCCCGCGGACCCTCAAAAGGAGCTTCTAGAGCCCGCGGTGCAGGGCACGCTGAACGTGCTGGAAGCCGCGAGGTGCGTGGGCGTGCGGCGCGTGGTGCTCACGTCCTCGATCTCCGCGATGGTGCCGAACCCGGGGTGGCCGGCGGGAAGGGTGGTGGACGAGGAGTCGTGGACGGACGTGGAGTTCTGCAGGGGGAGAGGGAAGTGGTACCCGGTGGCGAAGACTGAGGCAGAGAGGGCGGCGTGGAAGTTCGAGGGCGGTGTTGAGGTGGTGGCGGTTCTGCCGGCGACGTGTCTGGGGCCGCTGCTGCAGCCGGAGCTGAACGCGAGCTCCGGCGTGCTGCAAAGGCTGATGACGGGGTCGAGGGAGACGCAGGAGTATCACTGGTTGGGTGCGGTGCATGTGAAGGACGTGGCTAAAGCTCATGTGTTGCTCTACGAAACTCCCTCTGCTGCTGGTAGATATCTCTGCACCAACGGTATCTACCAGTTTTCTTGTTTTGCTGCCTGTGTCTCTGAATTGTACCCTGAATTCCCTATCCACAGGTTCCCAGAAGAAACACAACCTGGTCTGGTTCCATGTAAAGATGCAGCAAGGAGACTAATAGATTTGGGCCTTGTATTCACACCAATACAAGATGCTGTGAGAGAAGCAGCCGAGAGCCTTATAGCTAAAGGCTTCTTGCTGCGCTCACCCTCACAGAGTAATTAG 999 0.6046 MANENPGDEVVCVTGANGFIGSWLVRTLLENQNHTYTIHAAVFPGSDASHLFTLHPNAASRITVFPADLLDAASIFRAVAGCSGVFHVASPCTLEDPADPQKELLEPAVQGTLNVLEAARCVGVRRVVLTSSISAMVPNPGWPAGRVVDEESWTDVEFCRGRGKWYPVAKTEAERAAWKFEGGVEVVAVLPATCLGPLLQPELNASSGVLQRLMTGSRETQEYHWLGAVHVKDVAKAHVLLYETPSAAGRYLCTNGIYQFSCFAACVSELYPEFPIHRFPEETQPGLVPCKDAARRLIDLGLVFTPIQDAVREAAESLIAKGFLLRSPSQSN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1387 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 314 - -
Pvu6g1387 332 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 314 - -
Pvu6g1387 332 Pfam NAD dependent epimerase/dehydratase family 11 247 IPR001509 -
Pvu6g1387 332 Gene3D - 2 332 - -
Pvu6g1387 332 CDD FR_SDR_e 11 302 - -
Pvu6g1387 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 317 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1387 Pvu-Chr6 24776504 24780341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1387 9 324 Monolignol Biosynthesis Gene Families AT2G02400 64.890 1.87e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1387 - - vra:106775739 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1387 6 24776504 24780341 Pvu6g1387 6 24776504 24780341 ECH