Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1357 ATGGGTTGTATGCGTATGGTTGTAGTAGCAGTAGCAGTGTTGTGTACATTAGGGTTTCCAGTGTCATGTGCAGATTTGAGTACTACTTACTATGACATAACATGCCCTCTGCTATATTCTATTGTGTATGGAGTCATCAATAACGCTTACCTCACTGATCCCCTCATTGGTGCCAGCCTCATCAGACTTCATTTCCATGATTGCTTTGTTCAGGGTTGCGATGCATCAGTTTTGCTGAAAAACTCTGCTACCATAGAGAGTGAACAAGATGCCATTCCAAATATCAATTCAATAAGGGGTTTGGATGTGGTGAATAACATCAAAACAGCAGTAGAAAATAGTTGTCCAGAAACAGTTTCTTGTGCTGATATTTTGGCTATTGCAGCTGAAGTAGGTTCTGTTCTGGGAGGAGGTCCATCATGGTCAGTTCTATTAGGAAGAAGGGATAGCTTAACAGCAAACAGAAGCCTTGCTAATCTAAACCTTCCAGCACCAAGCTCCACACTGGATCAACTTCAACAATCCTTTGCTGTTCAAGGTCTCAACACCACTGATTTAGTTGCACTCTCAGGTGCACATACGTTTGGACGAGCTCACTGCAGCTTGTTCAGCAACAGATTACACAATTTCAACGACACTGAAAGTCCTGATCCAACTCTGAACAGCACTTACTTGGCAACATTGAGTGAGATATGCCCCCTAGATGCTACTGAGGACAACCTCGCCAATTTGGATCTGACCACACCTGATAAGTTCGATAACAAATACTACTCCAATCTCCAGAACCATAATGGCCTACTTCAGAGCGACAAAGAACTCTTCTCCACTTCTGGTGCTGACACCATTCACCTTGTGAATAGCTTCAGCAGTGACCAAAGTGTTTTCTTTGACAACTTTGCAGTGTCAATGACAAAGATGGGAAGTATTTCAGTGCTGACAGGGGATGAAGGAGAAATTCGGTTGCAGTGTAATTTGGTGAATGAAGATTCATCTGGATTAGTTGGTGTGGCATCCAAGGATCGAAAAGAGAAGGTGGTGGCAAAATCCAAATAA 1053 0.4283 MGCMRMVVVAVAVLCTLGFPVSCADLSTTYYDITCPLLYSIVYGVINNAYLTDPLIGASLIRLHFHDCFVQGCDASVLLKNSATIESEQDAIPNINSIRGLDVVNNIKTAVENSCPETVSCADILAIAAEVGSVLGGGPSWSVLLGRRDSLTANRSLANLNLPAPSSTLDQLQQSFAVQGLNTTDLVALSGAHTFGRAHCSLFSNRLHNFNDTESPDPTLNSTYLATLSEICPLDATEDNLANLDLTTPDKFDNKYYSNLQNHNGLLQSDKELFSTSGADTIHLVNSFSSDQSVFFDNFAVSMTKMGSISVLTGDEGEIRLQCNLVNEDSSGLVGVASKDRKEKVVAKSK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1357 350 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Pvu6g1357 350 Gene3D Peroxidase, domain 2 163 306 - -
Pvu6g1357 350 PANTHER PEROXIDASE 72-RELATED 9 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PANTHER PEROXIDASE 9 334 - -
Pvu6g1357 350 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Pvu6g1357 350 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1357 350 Gene3D - 30 327 - -
Pvu6g1357 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1357 Pvu-Chr6 24475020 24476689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1357 3 327 Peroxidase AT5G06720 56.615 2.38e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1357 K00430 - vra:106774868 544.658