Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1353 ATGAGGAGTTTTCATGCTACACTAAAAGTTCTGTGCTGTGTAGTGGTTGTGCTTGGAGTGTTTACACCCTCTCTGGATGCACAACTTGATCCTTCGTTTTACAGGAACACATGTCCCAGGGTTCACTCCATTGTTCGTGAAGTGGTGAGGGAGGTTTCAAAGAAGGACCCTCGCATGCTTGCCAGTCTCATTAGACTTCACTTCCATGACTGCTTTGTTCAAGGGTGTGATGCATCAGTTTTATTGAACAACACTGATACAATAGTGAGTGAGCAGCAAGCTCTGCCAAACAACAACTCCTTAAGAGGTTTGAATGTTGTGAATGATATCAAGACAGCAGTGGAAGCAGCTTGTCCCGGGGTGGTTTCTTGTGCAGATATTCTTACCCTTGCATCTGAAATATCTTCAGTTCTGGGAGGTGGTCCTGACTGGAAAGTTCCATTGGGAAGAAGAGATAGTTTAACAGCAAACCAAACACTTGCCAATGAAAACCTTCCATCTCCTTTCTCCAACGTCAGTGTACTTAAAGCTGCATTTCTTAAACAAGGTCTTACCACTACTGATCTAGTTGCACTCTCAGGTGCTCATACGTTTGGCAGAGCTCACTGCAATTTCATTCTTAACCGATTGTACAACTTCAGTGGTACTGGAAGACCCGATCCATCTCTGGACACAACTTATTTACAACAATTGCGCACACAGTGCCCCCAAGGTGGACCTAACAACCTTGTCAATTTTGATGTAACTACTCCTGATAAATTCGACAAGGCCTACTACTCCAATCTTCAGGTTAAGAAGGGCTTGCTTCAGAGTGATCAAGTGTTGTTTTCCACACCTGGTGATACCAATCCCATTGTGGTCAAATTCAATAGTGATCAAAAGGCTTTCTTTGACGCATTTGAGGCTTCAATGATTAAAATGGGTAATATTGATGTGCTCACTGGGAAAAAAGGAGAAATCAGAAAGCATTGTAATTTTGTTAACAAGAGAACTGCTGAACTTGAGATTGCTAGTGTGGCTTCTGAGGAATCTTCTGCAGAGGTTATGGTTAGCTCATACTAA 1062 0.4266 MRSFHATLKVLCCVVVVLGVFTPSLDAQLDPSFYRNTCPRVHSIVREVVREVSKKDPRMLASLIRLHFHDCFVQGCDASVLLNNTDTIVSEQQALPNNNSLRGLNVVNDIKTAVEAACPGVVSCADILTLASEISSVLGGGPDWKVPLGRRDSLTANQTLANENLPSPFSNVSVLKAAFLKQGLTTTDLVALSGAHTFGRAHCNFILNRLYNFSGTGRPDPSLDTTYLQQLRTQCPQGGPNNLVNFDVTTPDKFDKAYYSNLQVKKGLLQSDQVLFSTPGDTNPIVVKFNSDQKAFFDAFEASMIKMGNIDVLTGKKGEIRKHCNFVNKRTAELEIASVASEESSAEVMVSSY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1353 353 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601|GO:0042744
Pvu6g1353 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Pvu6g1353 353 Gene3D Peroxidase, domain 2 166 307 - -
Pvu6g1353 353 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PANTHER PEROXIDASE 72-RELATED 7 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 PANTHER PEROXIDASE FAMILY PROTEIN 7 338 - -
Pvu6g1353 353 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu6g1353 353 Gene3D - 33 328 - -
Pvu6g1353 353 Pfam Peroxidase 45 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1353 Pvu-Chr6 24427916 24430680 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1353 26 335 Peroxidase AT2G38380 58.786 3.57e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1353 K00430 - gmx:547499 575.859