Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1351 ATGTTCTTGCAGCAACAACATCAGAAAGAAAAAATGAATTCCCTTGGTCTCACTACTTTATGGTGTGTTGTGGTTGTGCTTGGAACACTACACTGCTCGTATGCACAACTAGATTCATCGTTTTACAATGTCACTTGTCCAAATGTGCATTCAATTGTATCTGATGTGCTCTCAAATGTTTCCGAATCTGATCCCCGCATGCTTGCAAGTCTCATCAGGGTCCATTTTCACGACTGTTTTGTTCAAGGGTGTGATGCATCAATTCTTTTGAACGACACTGCTACGATTGTGAGTGAACAAACTGCAGCACCAAATAACAACAGCCTAAGAGGCTTGGATGTTGTGAATCAGATCAAGACAGCAGTAGAAAATGCTTGCCCTGGCATAGTTTCTTGTGCTGATATTCTTGCTCTTGCAGCTCAGACATCTTCTGTTCTGGCTAAGGGTCCTAGTTGGGAAGTTCCATTGGGAAGAAGGGATAGTTTGACAGCAAATAAAACCCTTGCTGATCAAAACCTTCCTAGTCCTGTTTTTACACTTGATCAACTTATTGACGCATTTGCTAATCAGAACCTCACTGTCACTGATCTAGTTGCACTATCAGGTGCTCATACAATTGGTAAGGCTCACTGCAATTCTTTTGTTGATCGATTATACAATTTTAACGTCAGTGACAACCCAGATCCTACTCTGAACACAACTCTCTTAGAATCATTGCGAGCAATTTGTCCCAGTGGAGGAGTAGGAACAAATCTCACTGATTTGGATTTAACTACTCCTCACACATTCGATTCCAAGTACTATTCCAACCTACAACTTCAAAATGGCTTGCTTGGGAGTGATCAAGTGTTGTTTAGCACAGCTGATGCAGAAACCATTCCTATTGTCAACAGTTACATTGACAATCAAACTCTTTTCTTTGAACATTTCATAGCGTCAATGATAAAAATGGGCAACATTGGAGTGTTAAAAAAACCAGAGGGAGAAATTCGAACGCAGTGCAATTTTGTGAATGCAAATTCTTCTGCATTTGCTACTTTCACCACCAGAGAATCATCACAAAATGGAATGGTTAGCTCAGTCTAA 1086 0.4042 MFLQQQHQKEKMNSLGLTTLWCVVVVLGTLHCSYAQLDSSFYNVTCPNVHSIVSDVLSNVSESDPRMLASLIRVHFHDCFVQGCDASILLNDTATIVSEQTAAPNNNSLRGLDVVNQIKTAVENACPGIVSCADILALAAQTSSVLAKGPSWEVPLGRRDSLTANKTLADQNLPSPVFTLDQLIDAFANQNLTVTDLVALSGAHTIGKAHCNSFVDRLYNFNVSDNPDPTLNTTLLESLRAICPSGGVGTNLTDLDLTTPHTFDSKYYSNLQLQNGLLGSDQVLFSTADAETIPIVNSYIDNQTLFFEHFIASMIKMGNIGVLKKPEGEIRTQCNFVNANSSAFATFTTRESSQNGMVSSV* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1351 361 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 SUPERFAMILY Heme-dependent peroxidases 36 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 Pfam Peroxidase 55 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 ProSiteProfiles Plant heme peroxidase family profile. 36 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 Gene3D Peroxidase, domain 2 174 317 - -
Pvu6g1351 361 PANTHER PEROXIDASE 72-RELATED 17 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1351 361 PANTHER PEROXIDASE 17 346 - -
Pvu6g1351 361 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Pvu6g1351 361 CDD secretory_peroxidase 36 337 IPR033905 GO:0004601|GO:0042744
Pvu6g1351 361 Gene3D - 41 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1351 Pvu-Chr6 24407240 24409222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1351 16 343 Peroxidase AT5G06730 55.183 7.31e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1351 K00430 - gmx:100814455 518.85