Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1350 ATGAGGTTTCTTTGTGTTGTGGTGATAGCAATGGTGATGCTTGGAGGGTTACCCTTCTCCTCAGAGGCACAATTAGACCCCTTCTTCTACAGGCATAGTTGTCCACATGTGCATCGTGTTGTGTTTAAAGTGGTAGAGAAGGTTTCAAAAAGGGATCATCGTATGCCTGCAAGTCTCATCAGGCTTTTCTTTCATGACTGTTTTGTTCAAGGGTGTGATGCATCGGTTTTGTTGAACAACACTGCGACGATAGTGAGTGAGCAACAAGCTCTGCCAAACAACAACTCCTTAAGAGGTTTGGATGTGGTGAATGACATCAAGACAGCAGTGGAGAAGGTTTGTCCCAAAGTGGTTTCTTGTGCAGATATTCTTACCCTTGCAGCTGAAGTCTCTTCAGTTCTGGCTGGTGGGCCTTTCTTGAAATTTCCATTGGGAAGAAGGGATAGTTTGACAGCAAACAGAACCCTTGCCAATCAAAACCTTCCTTCTCCTTTCTCCACCCTCACTCAACTTAAAGATGCATTTGCTGTTCAAGGTCTTGACACTACTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGCAGAGCTCACTGCTTTTTCATTCTTGGCCGATTGTACAACTTCAGTGGTACTGGCAGACCCGATCCAACTCTTGACACTACTTACTTACAAGAATTGCGAAGAATATGCCCTCAAGGTGGACCTAACAATTTGGTGAATTTTGACCCAACCACTCCTGATATATTGGATAAAAACTATTACTCCAATCTTCAGGTTAAGAAGGGCTTGCTTCAGAGTGACCAATTGTTGTTCTCAACACCCGGTGCTGACACCATCAGCATTGTCAACAGGTTCAGTAGCAGCCAAAACGCTTTCTTTAATAGCTTTGCCACTTCAATGATAAAAATGGGAAACATTGGTGTTCTCACAGGGAAGAAAGGAGAAATAAGAAACCAGTGTAATTTTATTAACGCTAAATCTGTTGAACTTGATATGGGTAGTGTGACATCTGAATCAGAGGAGGGTTTGGTTGGATCAATATAG 1047 0.4288 MRFLCVVVIAMVMLGGLPFSSEAQLDPFFYRHSCPHVHRVVFKVVEKVSKRDHRMPASLIRLFFHDCFVQGCDASVLLNNTATIVSEQQALPNNNSLRGLDVVNDIKTAVEKVCPKVVSCADILTLAAEVSSVLAGGPFLKFPLGRRDSLTANRTLANQNLPSPFSTLTQLKDAFAVQGLDTTDLVALSGAHTFGRAHCFFILGRLYNFSGTGRPDPTLDTTYLQELRRICPQGGPNNLVNFDPTTPDILDKNYYSNLQVKKGLLQSDQLLFSTPGADTISIVNRFSSSQNAFFNSFATSMIKMGNIGVLTGKKGEIRNQCNFINAKSVELDMGSVTSESEEGLVGSI* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1350 348 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Pvu6g1350 348 PANTHER PEROXIDASE FAMILY PROTEIN 6 334 - -
Pvu6g1350 348 Gene3D - 29 325 - -
Pvu6g1350 348 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 Gene3D Peroxidase, domain 2 162 304 - -
Pvu6g1350 348 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 Pfam Peroxidase 43 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 ProSiteProfiles Plant heme peroxidase family profile. 24 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1350 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Pvu6g1350 348 PANTHER PEROXIDASE 72-RELATED 6 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1350 Pvu-Chr6 24400830 24403099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1350 20 338 Peroxidase AT2G38390 55.418 3.16e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1350 K00430 - gmx:112997743 577.4