Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1349 ATGCAGGGGTGCGATGCATCGATTTTGTTGAACAACACTGCGACGAGAGAGAGTGAGCAACAAGCTCTGCCAAACAACAACTCAATAAGAGGTTTGGATGTGGTGAGTGACATCAAGACAACAGTGGAGAAGGTTTGTCCCAAAGTGGTTTCTTGTGCAGATATTATTGCCCTTGCAGCTGAAGTCTCTACTATTCTGGCTGGTGGGCCTTCCTTGAAAATTCCATTGGGAAGAAGGGATAGTTTGACAGCAAGCACAACACTTGCCAATCAAAACCTTCCTTCTCCTTCCTCCACCCTCACTCGACTTAAAGAAGCATTTGCTGTTCAAGGTCTGGACACTACTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGCAGAGCTCACTGCTCTTTAATCCTTGATCGCTTGTACAACTTCAATTTTACTGGCAAACCTGATCCAACTCTTGACACTGCTTACTTACAAGAATTGCGAAAAATATGCCCTCAAGGTGGACCGAACAATTTGGTGAATTTTGAACCAACCAATCCTGATAAATTCGATCTAAACTTTTACTACAATCTTCAGAATAAGATGGGCTTGCTTCAGAGTGACCAAGTGTTGTTCTCAACACCTGGTGCTGACACCATCAACATTGTCAACAACTTCAGTAGCAACCAAAACTCTCTCTTTAATAGCTTTGCCACTTCAATGATAAAAATGGGAAACATTGGTGTTCTCACCGGGAAGGAAGGAGAAATAAGAAAACACTGTAATTGGACTAACGCTGAATCTGTTGAACTTTATATGGGTAGTGTGACATCTGAATCAGAGGAGGGTTTGGTTGGATCAATATAG 843 0.4247 MQGCDASILLNNTATRESEQQALPNNNSIRGLDVVSDIKTTVEKVCPKVVSCADIIALAAEVSTILAGGPSLKIPLGRRDSLTASTTLANQNLPSPSSTLTRLKEAFAVQGLDTTDLVALSGAHTFGRAHCSLILDRLYNFNFTGKPDPTLDTAYLQELRKICPQGGPNNLVNFEPTNPDKFDLNFYYNLQNKMGLLQSDQVLFSTPGADTINIVNNFSSNQNSLFNSFATSMIKMGNIGVLTGKEGEIRKHCNWTNAESVELYMGSVTSESEEGLVGSI* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1349 280 Pfam Peroxidase 2 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 Gene3D Peroxidase, domain 2 94 236 - -
Pvu6g1349 280 PANTHER PEROXIDASE FAMILY PROTEIN 2 266 - -
Pvu6g1349 280 ProSitePatterns Peroxidases proximal heme-ligand signature. 116 126 IPR019793 -
Pvu6g1349 280 CDD secretory_peroxidase 2 254 IPR033905 GO:0004601|GO:0042744
Pvu6g1349 280 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Haem peroxidase superfamily signature 68 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Haem peroxidase superfamily signature 116 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PANTHER PEROXIDASE 72-RELATED 2 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Plant peroxidase signature 30 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Plant peroxidase signature 115 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Plant peroxidase signature 173 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Plant peroxidase signature 189 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 PRINTS Plant peroxidase signature 231 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 Gene3D - 2 257 - -
Pvu6g1349 280 ProSiteProfiles Plant heme peroxidase family profile. 1 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g1349 280 SUPERFAMILY Heme-dependent peroxidases 2 257 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1349 Pvu-Chr6 24394199 24395582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1349 1 280 Peroxidase AT2G38390 52.837 2.22e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1349 K00430 - gmx:112997743 417.542