Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1337 ATGGCTAATTATTCTCATCCTCACATCTGCCAATGTCTGAGCCGCTTGTTTGGCTTCCGGCGACATTTTCTGGTCACTGTCACCGGAAACCGCCGCAAAACTGGCCAACAGTTGGTGGAGGAAGTGTTGTCTTTGGCCCAAGGCCTACTCCATCTTGGACTCGCACCTGGTCACGTGGTTGCCATCTCTGCACACAATAGTGATAGGTATCTGGAATGGTTATTAGCCATTGCATTTGCTGGGGGAATAGCTGCTCCTCTGAACTATAGATGGAGTTTTGAAGAGGCAAGATTAGCATTGGCTGCAGTGAAGCCAGTGTTGTTAGTGACTGACGACAGCAGTTACACATGGTACTCAAATCTCCAGCAAAATGATGTTCCATCTCTGAAGTGGCATGTTTTGTTGGATTCCCCTTCCTTAAATTTTACTAAGTGGAACGTGTTAACTCCAGAAATGATTAAAAGGCATCCTGTAAAGCTTGAACCATTTGATTATTCATGGGCACCTGAAGGCACTGTCATAATATGCTTTACTTCAGGAACTACGGGAAAGCCTAAGGGAGTCACTCTAAGCCATGGAGCTTTGCTCATACAGTCCTTAGCCAAGATTGCCATTGTTGGCTACAATGAGGATGATGTCTATCTGCATACTGCTCCGTTATGCCATATTGGTGGCTTGTCATCAGCCATGACCATGCTTATGGTTGGAGGTTGTCATGTCTTGATGCCAAAGTTTGATGCAGAATCAGCTATTGGTGCCATAGAGCAATATGCAGTGACATCTTTTATCACAGTTCCTGCAATAATGGCCAGTCTGATTTCTGTAATTAGGCCCAAAGTGATATGGAAAGGAGCAGAAACTGTCAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACATGAGCTCATCAAGGACACTGGCATATTCTTTCACAAAGCTAAACTTATTTCAGCTTATGGGATGACAGAGACATGCTCTTCATTGACATTCCTGACACTGTATGATCCAATGGATGAAAAGACACACAGGTCCCTTCAAACATTTGCTCTGGCAGCATACAAGTTTATTCAGCAGCCACAAGGTGTTTGTGTTGGCAAGCCTGCACCCCATGTTGAACTGAAGATAAGTGCAGATGCTTCTGGTCAAATTGGGAGAATTCTAACTAGAGGACCACACATAATGCTTAGGTATTGGGAAACTCACACAAATCCATTAAGTCAGAACAATGAAGCTTGGCTTGACACAGGTGATATTGGATCAATTGATCATTATGGTAATTTGTGGCTTCTTGGTCGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTACTACAACATCCAGGGATTGCAAGTGTTGTTGTTGTGGGAATCCCAGATGCTCAACTAACAGAGATGGTAGCAGCATGTATCCAACTTGGAGAAAATTGGCAATGGTCAGAGCAGTTGAGTGTTTCAAATGAAGAGTTTAATCTATCTAGAAAGAATCTCCAGCTACATTGTATAGAAAATCATTTAAGCAGGTTCAAGATACCAAAAATGTTTATTGCATGGAAAAAGCCATTTCCACTCACTACCACAGGAAAAATAAGAAGAGATGAAGTCAGAAAGGAAGTTATGTCTCTGCTACAATCTTTACACAGTAATCTTTGA 1680 0.4268 MANYSHPHICQCLSRLFGFRRHFLVTVTGNRRKTGQQLVEEVLSLAQGLLHLGLAPGHVVAISAHNSDRYLEWLLAIAFAGGIAAPLNYRWSFEEARLALAAVKPVLLVTDDSSYTWYSNLQQNDVPSLKWHVLLDSPSLNFTKWNVLTPEMIKRHPVKLEPFDYSWAPEGTVIICFTSGTTGKPKGVTLSHGALLIQSLAKIAIVGYNEDDVYLHTAPLCHIGGLSSAMTMLMVGGCHVLMPKFDAESAIGAIEQYAVTSFITVPAIMASLISVIRPKVIWKGAETVKKILNGGGSLSHELIKDTGIFFHKAKLISAYGMTETCSSLTFLTLYDPMDEKTHRSLQTFALAAYKFIQQPQGVCVGKPAPHVELKISADASGQIGRILTRGPHIMLRYWETHTNPLSQNNEAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILLQHPGIASVVVVGIPDAQLTEMVAACIQLGENWQWSEQLSVSNEEFNLSRKNLQLHCIENHLSRFKIPKMFIAWKKPFPLTTTGKIRRDEVRKEVMSLLQSLHSNL* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1337 559 Pfam AMP-binding enzyme C-terminal domain 448 538 IPR025110 -
Pvu6g1337 559 ProSitePatterns Putative AMP-binding domain signature. 175 186 IPR020845 -
Pvu6g1337 559 Gene3D - 20 432 IPR042099 -
Pvu6g1337 559 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 6 548 - -
Pvu6g1337 559 Gene3D - 435 551 IPR045851 -
Pvu6g1337 559 SUPERFAMILY Acetyl-CoA synthetase-like 8 553 - -
Pvu6g1337 559 Pfam AMP-binding enzyme 28 439 IPR000873 -
Pvu6g1337 559 PANTHER ACYL-COA SYNTHETASE 6 548 - -
Pvu6g1337 559 CDD AFD_class_I 175 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1337 Pvu-Chr6 24271412 24278057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1337 42 546 Monolignol Biosynthesis Gene Families AT4G19010 26.960 8.30e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1337 K14760 - gmx:100809925 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1337 6 24271412 24278057 Pvu6g1337 6 24271412 24278057 ECH