Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1335 ATGGTGAGTGTCCTTGGGGAGGGACTCTATTTTGTTTTGATTCTTGTGGCAGTGTCTGTGACAGTGAGCACCGTGGATGCTCAATCAAAGACTATTCTCTTAAATTGTGGTTCAAACTCTTCTTTGAATGTGGATGGTAGAAGATGGGTGGGGGATTTGGCCACCGATAAAAATGTCACCCTGAGCACCCCCAGTGTTGTTGCTAACACTTCTACATTAAGTGGCAGTTCAGTTTATGATCCTCTCTATAAAACAGCCAGAATTTTCACTGTTCCTTTGAATTACACCATCAAAGATGTTCAGGGAAACTACTTTGTTAGGTTCCATTTTTGCCCCTTTGTGATTGACGACTTCAATGTGAACGAGTCCTCATTTGGTGTAGTGGTCAATGGTCTGAAACTGTTATCAGAGTTTGATGTTCCTGGTAAGATATCCCACAAGAATATGAACTTGCTGAATTCTGGAAGAAATGCTAGTTCATTCTTCTTGGTCAAAGAATATATTCTGGCCGTGAATGGGGATATGCTTGTGATTGAGTTTGTTCCAACCACAAGCTCCTTTGGCTTCATCAATGCCATTGAGATTGTCCCAGTTGTGGGTGAGCTTTTTGCTGGCTCAGTTAGTAGAGTTGGTGGAAGTGGTGGAAACTTGAATTTGCCCGGACATGGGATGGAGACCATGTATAGGCTGAATGTCGGTGGTCCTGAGGTTCAGTCCAATCAGGATGGTGATCTTTGGAGAACTTGGGAAGTGGATTCTGGATATATGATCATTGAAAATGCTGGTTCAGGAATTAAGAACAGTTCTAACATTACATATTCTTCCGTGAATGATACTTCGGTGGCTCCTCTCCTTGTATATGAAACTGCGAGGGCAATGTCCAACTCTGGAGTCTTGGACAAAAGGTTCAATATGTCATGGAAATTTGAAGTAGATCCTGACTTTGATTATTTGATCCGTTTGCATTTTTGTGAGCTGGTTTATGAGAAGGCAAATGAGAGAGTATTTAGGATCTACATAAACAATAGGACAGCTGCGGATAACGTTGATGTGTTTGTGCGAGCTGGAGGGATGAATAAAGCATATCACTTGGACTATTCTGATCCTGTGTCATCAAATATTGACACGGTTTGGGTTCAACTCGGTCCTGACACAGCAGCTGGTAGTGCAGGAACTGATGCTCTCTTGAATGGTCTGGAGGTTTTCAAGCTTAGTCGAAATGGAAATCTTGCCTATGTTGAGAGGTTTGACATAGGTGGCAATTCAGGAAGCAAATCAACAGCAATATTTGTTTGGGTGGGAGTTGGAGTAGGTGTAGCTTCTTTAGCTATAGTTGCAATTATAGTTCTTGTATTCTGTTTCTGTAAAAGCAGGAAGAAGGAATCGAGTGATACCAAAAACAACCCTCAGGGTTGGAGGCCATTGTTCTTCTATGGAGGGGCTGCTGTTAACAACTCTGTGGGTGGCAAGGGATCAGCAGGAACCCAAAAGCTATACGGATCTGTGGCCTCAGTTAGAGTTGGCAAGAGGTTTACATTGGCAGAAATCAATGCTGCAACAAACAACTTTGATGACAGTTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAAGGGGAGATTGAAGAAGGCTTTCTGGCTGCAATTAAGCGCGCCAACCCCCAGTCTGATCAAGGCCTGGCTGAATTTGAGACAGAAATTGAGATGCTGTCCAAACTCAGACACAGACATCTGGTGTCCTTAATTGGTTTCTGCGAAGAGAAGAATGAAATGATCTTGGTTTATGAGTACATGGCCAATGGAACTCTCAGAAGCCACCTATTTGGGAGTGATCTCCCTCCCTTACCTTGGAAGCAGCGCCTAGAAGTGTGCATTGGTGCTGCAAGGGGACTGCACTACCTTCACACAGGTGCTGACCGCGGAATCATTCACAGGGATGTCAAAACAACCAATATTCTGCTAGATGAGAACTTTGTAGCCAAAATGTCTGATTTTGGATTGTCAAAAGATGGTCCAGCCTTTGAACACACCCATGTTAGCACAGCTGTGAAAGGAAGTTTTGGCTATCTAGACCCTGAGTACTTCAGAAGGCAGCAATTGACTGAGAAATCAGATGTATACTCCTTTGGAGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTGATAAACCCCACCTTGCCTAGAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAAAGGAAAGAATCACTTGAGACAATCATTGACCCTCGTCTTAGCGGAAACTATTGTCCTGAATCATTGTCCAAGTTTGGAGAGATAGCAGAAAAATGTCTTGCTGATGATGGAAAGAGCCGTCCCACCATGGGGGAGGTGTTGTGGCATTTGGAGTATGTCTTGCAACTACATGAAGCTTGGCTCAACATGGACACCACAGAAACTTCCTTCTCTGGTAGTAGTCATGCTTTGGGAGGTCCCAAAGATGGAGAACTTGAAATGGTACAAGAGTCTTCAAGTCAAGATGAAGTTGGTTTTGACCTCAAACACACAGCTTAA 2547 0.435 MVSVLGEGLYFVLILVAVSVTVSTVDAQSKTILLNCGSNSSLNVDGRRWVGDLATDKNVTLSTPSVVANTSTLSGSSVYDPLYKTARIFTVPLNYTIKDVQGNYFVRFHFCPFVIDDFNVNESSFGVVVNGLKLLSEFDVPGKISHKNMNLLNSGRNASSFFLVKEYILAVNGDMLVIEFVPTTSSFGFINAIEIVPVVGELFAGSVSRVGGSGGNLNLPGHGMETMYRLNVGGPEVQSNQDGDLWRTWEVDSGYMIIENAGSGIKNSSNITYSSVNDTSVAPLLVYETARAMSNSGVLDKRFNMSWKFEVDPDFDYLIRLHFCELVYEKANERVFRIYINNRTAADNVDVFVRAGGMNKAYHLDYSDPVSSNIDTVWVQLGPDTAAGSAGTDALLNGLEVFKLSRNGNLAYVERFDIGGNSGSKSTAIFVWVGVGVGVASLAIVAIIVLVFCFCKSRKKESSDTKNNPQGWRPLFFYGGAAVNNSVGGKGSAGTQKLYGSVASVRVGKRFTLAEINAATNNFDDSLVIGVGGFGKVYKGEIEEGFLAAIKRANPQSDQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLPWKQRLEVCIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPRDQINLAEWAMRWQRKESLETIIDPRLSGNYCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMDTTETSFSGSSHALGGPKDGELEMVQESSSQDEVGFDLKHTA* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1335 848 Gene3D Phosphorylase Kinase; domain 1 492 598 - -
Pvu6g1335 848 SUPERFAMILY Protein kinase-like (PK-like) 501 795 IPR011009 -
Pvu6g1335 848 MobiDBLite consensus disorder prediction 814 848 - -
Pvu6g1335 848 CDD STKc_IRAK 529 794 - -
Pvu6g1335 848 SMART serkin_6 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1335 848 Pfam Protein tyrosine and serine/threonine kinase 528 790 IPR001245 GO:0004672|GO:0006468
Pvu6g1335 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Pvu6g1335 848 PANTHER OS07G0166700 PROTEIN 21 837 IPR045272 GO:0004714|GO:0006468
Pvu6g1335 848 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1335 848 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Pvu6g1335 848 PANTHER OSJNBA0058K23.13 PROTEIN 21 837 - -
Pvu6g1335 848 Pfam Malectin-like domain 34 403 IPR024788 -
Pvu6g1335 848 Gene3D - 28 198 - -
Pvu6g1335 848 Gene3D - 223 429 - -
Pvu6g1335 848 Gene3D Transferase(Phosphotransferase) domain 1 599 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1335 Pvu-Chr6 24254390 24256936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1335 10 848 Receptor kinase-like Gene Family AT1G30570 62.485 0.0 1089
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu6g1335 Malectin_like 1.9e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1335 - - gmx:100791403 1500.34