Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1333 ATGAAGCTATTTAGCCTTTTAGTGTTATCTTTGTATTTTTTCTCCGTGGTGGGGCAGCTTCCTTCTCAGGACATTTTAGCATTGCTGGAGTTTAAGAAAGGAGTCAAGCATGACCCCAGCGGCTATGTGCTCAATTCCTGGAATGAGGAATCCATTGATTTTGATGGATGCCCATCTTCATGGAATGGAGTTTTGTGCAATGGTGGTAATGTTGCTGGGGTTGTCCTTGATAACTTGGGTCTCTCTGCTGACACAGACTTGAGTATGTTTTCAAATCTCACTAAGCTTGTAAAACTCTCCATGGCCAACAATTCCATAACAGGAAGTCTACATGGCAGCATTGCTGAGTTCAAAAGCCTTGAGTTCCTGGATATTTCCAATAACCTCTTTTCCTCATCTTTGCCACTGAATATTGGTAAATTAAGCAGTCTGCAAAATCTGTCTTTAGCTGGAAACAATTTCTCTGGTCCAATTCCCGACTCTATTTCAGAAATGGCTTCCATCAAGTCCCTGGATTTGAGCCGCAACTCTTTCTCTGGAGAACTGCCAGTGTTGTTGACAAAGGTGACTAGCCTTGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGAAAAATTCCCAAAGGTTTTGAGATGATTACTGTTCTTGAAAAACTTGACTTGCATGGGAATATGCTTGAAGGTAATTTGGATGTTGAATTTTTGCTTTTATCGAGTGCCAGCTATGTTGATTTAAGTGAGAACAGGCTGTCTAGTTCTGATTCCAAGCAGAAGTTTCTACCACGACTATCTGAAAGTATTAAGCATCTGAATTTAAGTCACAACCAGCTTACGGGATCATTGGCCAGTGGAGTTGCAGAACCTGTTTTTGAAAACTTGAAAGTGTTAGACCTCAGCTACAATCAGTTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTCCAGGTCCTCCGGCTTAGCAACAACATGTTTTCAGGATTTATTCCGAATGGCCTATTGAAAGGAGACTCTTTGGTTTTAACTGAACTGGATTTGAGTGCCAACAATCTCTCGGGACCACTAAGTATAATTACATCAACAACACTTCACTCTCTTAACCTCTCATCAAATCAGTTCACTGGTGAACTGCCACCCCTTACGGGAAGCTGTGCTGTACTTGATCTGTCAACCAACAAATTAGAAGGAAATTTAACCAGGATGTTGAAATGGGGGAATATAGAATTTCTTGACCTCAGTGGTAATCATTTGATGGGGACCATTCCAGAGGAAACTCCTCAATTTTTGCGACTAAATTATTTGAATCTATCCCATAATTCTCTTAGTAGCTCCCTTCCAAAAGTCTTGACTCAGTATCCAAAGCTGAGAGTGCTTGACATTAGTTTCAACCAACTAGATGGACCACTTCTATCTGGTCTACTCACAATGTCCACATTGCGAGAGCTGCATCTTGAAAATAATGTGATCTCTGGTGGCATCAATTTCTCATCTCCTGACCAATCTGATCTTCAGATTCTTGATCTTTCTCACAACCAGCTTAATGGCTATTTTCCTGATAAGTTTGGGTCATTAACTGGCCTTAAAGTGCTAAATATTGCTGGAAATAATTTTTCTGGCTCTCTTCCAACCACCATTGCTGACATGAATTCACTTGACTCCATGGATATATCAGAGAATCATTTTACTGGACCTCTACCAGATAACATGCCACAGGGGCTCCAAAATTTCAATGCTTCTGAAAATGATCTATCTGGACTCGTCCCTGAAGTTCTTAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATTCCAAGTTACATTTTCCAAATGGTCCTCCAGGATCAACTGCTTCACCTGCTGAAAGTTCCAAGAGGAAGCATTTGAACACCATTGTTAAAGTAATAATCATAGTGTCATGTGTGGTTGCTCTCTTCATTTTAATCCTGCTTGCAGTCTTCATACACTATATACGTATATCAAGATCTCCACCAGAATATGATACAAGTAAGGATATCCACAGGCATCCTCAACCTATTATCTCGGCTCCTGTTCGAACTACTGATAGGGGTGGTGCTTTGGTTGTTTCAGCCGAGGACCTTGTGACCACACGTAAAGAGTCGCCATCAGAGGTAATAAGCTCTGATGAAAAAATTGCAGCTGTAACAGGGTTCTCTCCATCAAAACAAAGCCACTTTTCATGGTCACCGGAATCTGGCGATTCATTCACTGGTGAAAATCTTGCAAGACTAGATACAAGGTCACCAGATCGGTTGATTGGAGAGCTGCATTTTCTTGATGATTCGATAACATTGACACCTGAGGAGCTCTCAAGGGCCCCAGCTGAAGTTTTGGGAAGAAGTAGTCATGGTACTTCTTATAAGGCCACTTTGGAGAATGGTTTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTAGCAAAACAGAGAAAAGAATTTGTCAAGGAAACCAAAAAATTTGCTAACATCAGACATCCAAATGTTGTGGGATTGAGAGGATACTATTGGGGCCCTACACAGCACGAGAAGCTCATCCTTTCAGATTACATCTCTCCGGGAAGTCTTGCAAGCTTTCTTTATGATCGACCAGGAAGAAAAGGTCCACCATTAACTTGGATCCAGAGACTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCCATCCCTCATGGGAACCTCAAAGCCACAAATGTGTTGTTAGACACAACTGATATGAATGCACGAGTTGCTGATTACTGCCTTCACCGGCTCATGACTCAAGCAGGTACTATTGAGCAGATTCTTGATGCTGGGGTCTTAGGTTATCGAGCACCTGAGTTAGCTTCCTCCAAGAAGCCAATGCCCTCCTTCAAGTCAGACGTTTATGCTTTTGGAGTGATACTTTTGGAACTTCTAACTGGAAGGTGTGCTGGTGATGTGATATCTAGTGAGGAGGGAGGTGTTGATCTGACAGATTGGGTGAGGGTGCGTGTGGCAGAAGGCAGAGGCTCAGAATGTTTTGATGCTACCTTGATGCCAGAAATGAGCAATCCTATTGTTGAAAAGGGAATGAAGGAGGTCCTGGGAATAGCCATGCGATGCATTCGATCAGTTTCTGAAAGGCCTGGCATCAAAACTATATATGAAGATCTCTCTTCTATATAG 3186 0.42 MKLFSLLVLSLYFFSVVGQLPSQDILALLEFKKGVKHDPSGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSMFSNLTKLVKLSMANNSITGSLHGSIAEFKSLEFLDISNNLFSSSLPLNIGKLSSLQNLSLAGNNFSGPIPDSISEMASIKSLDLSRNSFSGELPVLLTKVTSLVSLNLSHNGFTGKIPKGFEMITVLEKLDLHGNMLEGNLDVEFLLLSSASYVDLSENRLSSSDSKQKFLPRLSESIKHLNLSHNQLTGSLASGVAEPVFENLKVLDLSYNQLDGELPGFDFVYDLQVLRLSNNMFSGFIPNGLLKGDSLVLTELDLSANNLSGPLSIITSTTLHSLNLSSNQFTGELPPLTGSCAVLDLSTNKLEGNLTRMLKWGNIEFLDLSGNHLMGTIPEETPQFLRLNYLNLSHNSLSSSLPKVLTQYPKLRVLDISFNQLDGPLLSGLLTMSTLRELHLENNVISGGINFSSPDQSDLQILDLSHNQLNGYFPDKFGSLTGLKVLNIAGNNFSGSLPTTIADMNSLDSMDISENHFTGPLPDNMPQGLQNFNASENDLSGLVPEVLRKFPSSSFFPGNSKLHFPNGPPGSTASPAESSKRKHLNTIVKVIIIVSCVVALFILILLAVFIHYIRISRSPPEYDTSKDIHRHPQPIISAPVRTTDRGGALVVSAEDLVTTRKESPSEVISSDEKIAAVTGFSPSKQSHFSWSPESGDSFTGENLARLDTRSPDRLIGELHFLDDSITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFVKETKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWIQRLKIAVDVARGLNYLHFDRAIPHGNLKATNVLLDTTDMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELASSKKPMPSFKSDVYAFGVILLELLTGRCAGDVISSEEGGVDLTDWVRVRVAEGRGSECFDATLMPEMSNPIVEKGMKEVLGIAMRCIRSVSERPGIKTIYEDLSSI* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1333 1061 ProSiteProfiles Leucine-rich repeat profile. 292 314 IPR001611 GO:0005515
Pvu6g1333 1061 SUPERFAMILY Protein kinase-like (PK-like) 782 1058 IPR011009 -
Pvu6g1333 1061 PANTHER OS07G0626500 PROTEIN 6 1061 - -
Pvu6g1333 1061 Gene3D Phosphorylase Kinase; domain 1 772 856 - -
Pvu6g1333 1061 SUPERFAMILY L domain-like 41 379 - -
Pvu6g1333 1061 Gene3D Ribonuclease Inhibitor 253 619 IPR032675 -
Pvu6g1333 1061 Gene3D Ribonuclease Inhibitor 137 239 IPR032675 -
Pvu6g1333 1061 Pfam Leucine Rich repeat 266 279 IPR001611 GO:0005515
Pvu6g1333 1061 Pfam Leucine Rich repeat 292 306 IPR001611 GO:0005515
Pvu6g1333 1061 Pfam Leucine Rich repeat 361 377 IPR001611 GO:0005515
Pvu6g1333 1061 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Pvu6g1333 1061 ProSiteProfiles Protein kinase domain profile. 779 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1333 1061 SMART LRR_typ_2 93 116 IPR003591 -
Pvu6g1333 1061 SMART LRR_typ_2 189 212 IPR003591 -
Pvu6g1333 1061 SMART LRR_typ_2 290 312 IPR003591 -
Pvu6g1333 1061 SMART LRR_typ_2 525 548 IPR003591 -
Pvu6g1333 1061 SMART LRR_typ_2 117 141 IPR003591 -
Pvu6g1333 1061 SMART LRR_typ_2 313 337 IPR003591 -
Pvu6g1333 1061 SMART LRR_typ_2 429 452 IPR003591 -
Pvu6g1333 1061 Gene3D Ribonuclease Inhibitor 22 136 IPR032675 -
Pvu6g1333 1061 PANTHER - 6 1061 - -
Pvu6g1333 1061 SUPERFAMILY L domain-like 290 592 - -
Pvu6g1333 1061 Gene3D Transferase(Phosphotransferase) domain 1 858 1061 - -
Pvu6g1333 1061 Pfam Leucine rich repeat 411 466 IPR001611 GO:0005515
Pvu6g1333 1061 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Pvu6g1333 1061 Pfam Protein tyrosine and serine/threonine kinase 783 981 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1333 Pvu-Chr6 24230013 24235294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1333 1 1049 Receptor kinase-like Gene Family AT1G55610 26.595 7.18e-80 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu6g1333 PK_Tyr_Ser-Thr 1.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1333 - - gmx:100793639 1893.24