Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1232 ATGATTTCCATTCCCTCTTCCTCACTTGCTCCATTTAGCCAAAGAGAAGAAATGGTTGACCGTACAAGGAGCAAGATTCTTATAAGAGAATATAATGAAGATAAAGATGTTAAAATGGTGAGAAAACTAGAGAGGAACTCTGAGATTGGGACTAAAAAGGTGGTCTCCATTTTTACCAACATGATGGGTGATCCTTTATCTAGGATTAGGTTTTTCCCCCTTCATGTAATGCTGGTAGCTGAGCTTCTGGAGAGCAAGGAACTTGTTGGAGTGATTAGGGGAGTAATTAAGAATGTAGGTACTCTTTCTGGATCACTCTTGAAGATGGGTTACATCCTTGGCCTCAGAGTCTCTCCTACTTACAGGAGAAAGGGGGTTGCACTTAGACTTATCGCTGCAGTTGAAGAATGGATGGTGAGAAATGGAGCTGAGTATGCATTCCTTGCCACTGAAAAGGATAATGATGCTTCTAAAAACCTATTCACAATCAAATGCAATTATGTGAACCTTAGCTCACTTGTCATATTTGTCCAACCAATTAGCTCCCTCACAAAGCATATTTCCAGGGATATAAAAATAGAGAAAGTGGACATAGATCTAGCAATTTCGTTATACAGAAGAACCTTGAGAACCAAAGATTTGTATCCACTAGATATGGACGTTATTCTGAAGGAGAAACTCAGTGTAGGCACATGGGTAAGTTATTATAAAAGGGAGGGCCTCAATTTGCGAAGTAAGGTAAATAATGAAGAAGATCTCATTAGCAACGAAACTTCAAACTCATGGGTCATTTTTAGTATATGGAACACTTGTGAAGCTTACAAGCTTCCAGTTAGAAGGTCTCAACAAGTAAGGTTTCTTCTTACAACCTTAAATCACGCAAGAGAGAGACTTTTCCCTTGTCTTAAAATGTCGATGAGTAACTCACTTTGTAGATCCTTTGGGTTTCTCTTTCTTTATGGAATCTATGGACAGGGAGAGAACCTTGGAGAGCTCATGGAATCCATGTGGAGATTCACATCAAGAGTGGGAGAAGGAATGGGGAACTGTAAGGTGTTTATAACTGAGTTAGGGTTTGGTGATCCACTTGCCAACCATGTTCCTCAAACAGATTCCATCTCATGTATCGATGATCTATGGTATACAAAGAGACTTTCAAGCCATGCTGATGAAAACATTGATGAAATATTGGTGAGACAAGTGGGAAATGTGTTTGTTGACCCTAGAGATTTTTAG 1236 0.394 MISIPSSSLAPFSQREEMVDRTRSKILIREYNEDKDVKMVRKLERNSEIGTKKVVSIFTNMMGDPLSRIRFFPLHVMLVAELLESKELVGVIRGVIKNVGTLSGSLLKMGYILGLRVSPTYRRKGVALRLIAAVEEWMVRNGAEYAFLATEKDNDASKNLFTIKCNYVNLSSLVIFVQPISSLTKHISRDIKIEKVDIDLAISLYRRTLRTKDLYPLDMDVILKEKLSVGTWVSYYKREGLNLRSKVNNEEDLISNETSNSWVIFSIWNTCEAYKLPVRRSQQVRFLLTTLNHARERLFPCLKMSMSNSLCRSFGFLFLYGIYGQGENLGELMESMWRFTSRVGEGMGNCKVFITELGFGDPLANHVPQTDSISCIDDLWYTKRLSSHADENIDEILVRQVGNVFVDPRDF* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1232 411 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 18 411 - -
Pvu6g1232 411 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 26 228 IPR000182 GO:0016407
Pvu6g1232 411 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 20 161 IPR016181 -
Pvu6g1232 411 Gene3D - 28 180 - -
Pvu6g1232 411 Pfam Acetyltransferase (GNAT) family 78 166 IPR000182 GO:0016407
Pvu6g1232 411 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 18 411 - -
Pvu6g1232 411 CDD NAT_SF 77 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1232 Pvu-Chr6 23252641 23254432 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu6g1232 Acetyltransf_1 2.5e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1232 - - gmx:100808694 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1232 6 23252641 23254432 Pvu6g1232 6 23252641 23254432 ECH
Pvu3g1183 3 28538083 28539739 Pvu6g1232 6 23252641 23254432 PCT