Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1228 ATGGAGAACCAACAGGAAGTGATGGTTGTAGGAAAGGTATGTGAAATCTATGAAAAAATCTCCAAACTAGGAGACCTCAGCCCTTCCAGCCATGTCAACAACCTCTTCACCCAACTTGTCACCATTTGCACCACCCCATGTCAAATAGATGTTTCTCAGCTGAGTGAACAGGTTAGAGAAACCATAGCAAAGCTAATTAGACTTTGTGGGAAAGCGGAGGGGCTTCTTGAGAATCACTACTCAACCCTCATAGGATCACAAGAGAACCCTTTAAACCACATGAAACTCTTCCCCTACTACTCTAATTACCTCAAACTAAGTCACTTGGAGTTCACCATGCTCACCACACACTGCACCCAAGTCCCCTCCCAACTCGCCTTTGTGGGCTCAGGTCCCCTTCCTCTCACCTCAATCATGTTGGCCACCCATTACCTCAGAGAGACATGCTTCCACAACTACGACATGGATCCTTTGGCCAATGCCAAGGCTCATGGCTTGGTCTCTTCGGACCCTGACTTGTCAAAGAGAATGTTCTTCCACACCAATGACATTCTAAACGTGTCAAATGGCCTCAAGGACTATAACGTGGTCTTCTTGGCAGCACTTGTGGGCATGGACCATAAGGAGAAAGCAGAAGTCATCAAGCACCTAGCCAAGTTCATGGCCCCAGGAGCTATTTTGTTGTTGAGGAGTGCACATGGTGCTAGAGCCTTCCTCTACCCGGTGGTTGATCCTTCTTCTGATCTCAAAGGTTTTGAAGTTCTCTCGGTTTTTCACCCCACTGATGAGGTTATTAACTCAGTTATTGTGGCACGCAAGCATTTGGTGAATCAAGGGACTTATTCAGCAGTGTTGGCTAGCAAATGCTCTGGAGTTGAAGGGTTTAATCCCTTCAACCATGGGAACGTTATTGAGGAGTTGACAGTTGAGGATCAAGCTTGA 942 0.4671 MENQQEVMVVGKVCEIYEKISKLGDLSPSSHVNNLFTQLVTICTTPCQIDVSQLSEQVRETIAKLIRLCGKAEGLLENHYSTLIGSQENPLNHMKLFPYYSNYLKLSHLEFTMLTTHCTQVPSQLAFVGSGPLPLTSIMLATHYLRETCFHNYDMDPLANAKAHGLVSSDPDLSKRMFFHTNDILNVSNGLKDYNVVFLAALVGMDHKEKAEVIKHLAKFMAPGAILLLRSAHGARAFLYPVVDPSSDLKGFEVLSVFHPTDEVINSVIVARKHLVNQGTYSAVLASKCSGVEGFNPFNHGNVIEELTVEDQA* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1228 313 Pfam Nicotianamine synthase protein 3 276 IPR004298 GO:0030410|GO:0030418
Pvu6g1228 313 Gene3D Vaccinia Virus protein VP39 7 274 IPR029063 -
Pvu6g1228 313 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Pvu6g1228 313 PANTHER NICOTIANAMINE SYNTHASE 1 313 - -
Pvu6g1228 313 PANTHER NICOTIANAMINE SYNTHASE 3 1 313 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1228 Pvu-Chr6 23217022 23218312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1228 5 312 Nicotianamine Synthase Gene Family AT1G09240 53.651 5.62e-116 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1228 K05953 - gmx:100814069 556.214