Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1227 ATGGAAGACTTGTACCGTGTTAGTTTCAGTACAGTGGATGAAAATTCTAGTTCATCCAATGATATTTTCTGGGGCACTGAGGAACTGAATGAAGTATACAAGGTACAATTTTCTGGAGCAGAAGATCATAGAGTTTATGGGGGAGTAGACCCATTTTACTCTAATTTTGAGTTTTCCCCAGATTATTCATCACAAGAAGGAAACCTTTTATCTACTAATCAAGAAAAGTACCACCAGCAACAATCATACCATGATTATGGGCATTTGGATGACATCCTTCAGTTTGACATGGTCTCTCCACCACTCCAATTTGATGCACAATATCCAACCACGGTTCCATTGTGTGGCACAACAAAGGATGAGCCACACTCAACTATCCCTTTAGCCTCACTTGAGATCTTGAAGAACTATGGCAAGGGCTTCAAGAGGTTGTCCAATGAAGGCAAATCCCTCCAGCCAGTAGTTGATTCTGTGGCCACAAATGAATTTGTTTTGAGAAGGCTCTCAACTGAAGATGTCATGAGGATAGCAGGAACAAGGTTCATTCAATCATCATCTTCAGAGTCAGAACCTTTGCCTTTCTTGGAAACTCACCCTTATGGTTTTTCCTTCTCTGGACTCTCTGATGAGGAGAAAGAGGATGTGGCTCTAGCTGAGTCCCTCTTGGCTTCTGCTGAGAAAGTGGGTCATCAACAATTTGAACGTGCAAGCAAGTTGCTAAGTCATTGTGAATCATTGTCAAGCAAAACTGGGAGCCCCGTTAAGAGAATTGTTCATTATTTTGTTGAAGCACTTCTCCAAAGGATAGATAGAGAAACAGGAAGAGGATCATCCAAGGATTTGCAAAAGGATCAGTCATTTGATCCTGAAGAGGCAGCCAAGGAACTAAACCCCACTATTGTTGCATTTTGTGAAGAGCTTCCCTTTAGTCAAATTTCAGTGTTCACTGCAGTTCAAGCTATAATAGAAGATGTGGCTGAAGCAAAGAAGATTCATGTTATTGATCTTGAAATCAGAAAGGGTGGCCAATGGGCTATCCTAATGCAAGCCCTGGAGTCAAGACACCAATGTCCAATTGAGCTTCTAAAGATTACCGCTATTGAAAGTGGAACCACTAGACATATTGTAGAGGACACTGGTAAGAGATTGAAGGATTTTGCTCAAGGTTTGAACATACCCTTCTCTTTCAACATTGTCATGGTACCAGACCTATTACATCTCAGAGAAGATCTTTTTGAGATTGATCCCGAGGAAGCACTTGCTGTTTATTCACCGTATGCACTTAGAACCAAGATTCAACAATCAGACCAGCTTGAAGCCATCATGAGAGTGATCAGAACCTTGAATCCTAATGTGATGGTAGTAGCTGAAATTGAGGCAAATCACAACTCCACATCTTTTATAAACCGTTTCATTGAGGCTCTTTTCTTCTTCAGTGCATTCTTTGATTGTCTTGACGTTTGCATGAAGGGGAATGACAAGAACCGAATGATTATGGAATCAGTATACTTCAATCATGGAATCAGGAACATTGTGGCCACAGAAGGAGCAGAAAGAAAGACTAGGAATGTGAAGATTGATGTGTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGTGGAGAAAGAACTGAGCACTTTGTCTTTATACCAAGCAGATTTAGTGAGTAAAAGATTTCCTTGTGGAAGTTTTTGCACGTTTGACAAGAATGGGCAGTGCCTCCTTGTTGGATGGAAAGGAACACCAATTAATTCGGTTTCTGTCTGGAAATTCCTTTGA 1776 0.4122 MEDLYRVSFSTVDENSSSSNDIFWGTEELNEVYKVQFSGAEDHRVYGGVDPFYSNFEFSPDYSSQEGNLLSTNQEKYHQQQSYHDYGHLDDILQFDMVSPPLQFDAQYPTTVPLCGTTKDEPHSTIPLASLEILKNYGKGFKRLSNEGKSLQPVVDSVATNEFVLRRLSTEDVMRIAGTRFIQSSSSESEPLPFLETHPYGFSFSGLSDEEKEDVALAESLLASAEKVGHQQFERASKLLSHCESLSSKTGSPVKRIVHYFVEALLQRIDRETGRGSSKDLQKDQSFDPEEAAKELNPTIVAFCEELPFSQISVFTAVQAIIEDVAEAKKIHVIDLEIRKGGQWAILMQALESRHQCPIELLKITAIESGTTRHIVEDTGKRLKDFAQGLNIPFSFNIVMVPDLLHLREDLFEIDPEEALAVYSPYALRTKIQQSDQLEAIMRVIRTLNPNVMVVAEIEANHNSTSFINRFIEALFFFSAFFDCLDVCMKGNDKNRMIMESVYFNHGIRNIVATEGAERKTRNVKIDVWRAFFSRFGMVEKELSTLSLYQADLVSKRFPCGSFCTFDKNGQCLLVGWKGTPINSVSVWKFL* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1227 591 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 38 589 - -
Pvu6g1227 591 Pfam GRAS domain family 218 589 IPR005202 -
Pvu6g1227 591 ProSiteProfiles GRAS family profile. 208 589 IPR005202 -
Pvu6g1227 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 589 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1227 Pvu-Chr6 23211548 23213479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1227 207 590 GRAS Transcription Factor Family AT3G03450 30.491 6.41e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu6g1227 GRAS 9.9e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1227 - - gmx:100818523 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1227 6 23211548 23213479 Pvu6g1227 6 23211548 23213479 ECH