Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1217 ATGGGTCGCAGTGGGGAGAAGAGAGTGAAGGGTTTTGAGGGGAAGAAGGAAGGGTTCCGAGGAGGAGTGCCGAAAGGGTGTTTGGCTATAAAGGTGGGTCAAGGAGAAGAGCAACAACGGTTCGTGGTGCCAGTGATGTACTTCACTCACCCCCTCTTCATGCAGCTTCTGAAGGAGGCAGAGGAAGAGTACGGGTTCGACCAAAAAGGAACCATAGCCATCCCTTGTCACATCGAGGAGTTTAGGAGCGTTCGAGGCATCATCGACAGCGAAAAGTCTCTCCTTCACCACAATCACGTTCGCTGCTTTGGCTTCTGA 318 0.5252 MGRSGEKRVKGFEGKKEGFRGGVPKGCLAIKVGQGEEQQRFVVPVMYFTHPLFMQLLKEAEEEYGFDQKGTIAIPCHIEEFRSVRGIIDSEKSLLHHNHVRCFGF* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1217 105 Pfam Auxin responsive protein 17 84 IPR003676 GO:0009733
Pvu6g1217 105 PANTHER SMALL AUXIN-UP RNA-RELATED 21 99 - -
Pvu6g1217 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1217 Pvu-Chr6 23138316 23139125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1217 23 98 Calmodulin-binding Proteins AT5G20810 44.737 1.45e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1217 K14488 - var:108342322 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1217 6 23138316 23139125 Pvu10g1224 10 38492595 38495726 PCT