Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1151 GCTGGGACTCCTTTAAGCATGGAGACACCCCTCAAATCATCAGGAAATACTGATCATGGTTTAATGAAGAAATTGAAGGAGTTTGATGGACTTGCAATGTCAATAGGCAATGGCCATAATGAAAGTGTAGAGCGTGGAGGTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAGCACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCGACCACTGATGGAGAAGGGAAAACTGAGATACAAAGCAGTCCCATTTCTAAAGATACTGCAGCTTCTAATAAGATCGTGGCAGTTGCCCCTGCCAGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACCACCGTGCTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAAGCAAATACCACAAGTGCCCCACAACCTTCTGTATTACCTGCAGAAGCTTGGTTACAGAATGAGCGTGAGCTGAAACGAGAGAGGCGTAAACAATCTAACAGAGAATCTGCTAGAAGGTCTAGACTAAGAAAGCAGGCTGAAACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATACTGAGAATGAGACACTGAAATCAGAAATAAATCGACTGACTGAAAGTTCTGAGAAAATGAGGGTGGAAAATGCAACATTGAGGGAAAAACTTAAAAGTGCTCAACTGGGACAAACACAAGAGATAACTTTGAACATAATTGACAGTCAGAGGGCTACACCTGTAAGCACAGAAAACTTACTATCTAGAGTGAATAATAATTCCAGTTCTAACGATAGAACTGTGGAGGATGAGAATGGTTTTTGTGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 939 0.4324 AGTPLSMETPLKSSGNTDHGLMKKLKEFDGLAMSIGNGHNESVERGGENRLSQSVDTEGSSDGSDGSTSGANQTRRKRSREGTPTTDGEGKTEIQSSPISKDTAASNKIVAVAPASVAGTIVGPVVSSGMTTVLELRNPSSVHSKANTTSAPQPSVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENETLKSEINRLTESSEKMRVENATLREKLKSAQLGQTQEITLNIIDSQRATPVSTENLLSRVNNNSSSNDRTVEDENGFCENKPNSGAKLHQLLDTSPRADAVAAG* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1151 312 MobiDBLite consensus disorder prediction 139 194 - -
Pvu6g1151 312 PANTHER G-BOX-BINDING FACTOR 3 2 312 - -
Pvu6g1151 312 MobiDBLite consensus disorder prediction 1 16 - -
Pvu6g1151 312 Pfam bZIP transcription factor 166 228 IPR004827 GO:0003700|GO:0006355
Pvu6g1151 312 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Pvu6g1151 312 MobiDBLite consensus disorder prediction 47 73 - -
Pvu6g1151 312 Coils Coil 159 179 - -
Pvu6g1151 312 MobiDBLite consensus disorder prediction 139 155 - -
Pvu6g1151 312 PANTHER G-BOX-BINDING FACTOR 3-RELATED 2 312 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pvu6g1151 312 CDD bZIP_plant_GBF1 171 219 IPR045314 GO:0003700|GO:0006355
Pvu6g1151 312 MobiDBLite consensus disorder prediction 88 103 - -
Pvu6g1151 312 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 231 IPR004827 GO:0003700|GO:0006355
Pvu6g1151 312 SUPERFAMILY Leucine zipper domain 169 224 IPR046347 GO:0003700|GO:0006355
Pvu6g1151 312 Coils Coil 186 234 - -
Pvu6g1151 312 MobiDBLite consensus disorder prediction 267 312 - -
Pvu6g1151 312 Gene3D - 169 224 - -
Pvu6g1151 312 MobiDBLite consensus disorder prediction 164 194 - -
Pvu6g1151 312 MobiDBLite consensus disorder prediction 1 103 - -
Pvu6g1151 312 Pfam Disordered region downstream of MFMR 18 146 - -
Pvu6g1151 312 SMART brlzneu 166 230 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1151 Pvu-Chr6 22579254 22581732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1151 2 312 bZIP Transcription Factor Family AT2G46270 45.367 5.98e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu6g1151 MFMR_assoc 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1151 K09060 - gmx:100781875 525.398