Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1140 ATGTCGAAGACAATGAAGAGAGTGAATCCATTTTGTTTATCACACATTATTGTTGCTCTCTCAATGGTGTGTTTGGTATGGCAATGTAATTCAAAGGCAGTTACGTATATAGTTCACATGGACAAGTCTTACATGCCCAAAGTTTTCACCTCCCATCGCCATTGGTACTCATCCACCCTAACTTCTCTGGACTCCACTCAACACGTTAATAGTAGCATTTTGTACTCTTACGAAAACGCACTTCACGGTTTCAGTGTTGCCTTATCACCACAGCAGTTAGAGAGTCTAAAAGAAACCCCAGGTTTCATCTCAGCATACAGAGACAGAGCAACCACTCTTGACACCACCGCTTCCTACGCCTTCCTCTCTCTCAACATCTCTCACGGCCTCTGGCCAGCTTCCAACTACGGCCAAAACGTCGTCGTTGGCGTCGTCGACTCCGGAATCTGGCCAGAGAGCGACAGCTTCAAAGACGATGGCATGGTAATTCAAACTCCTCCAAAATGGAAGGGAAAGTGCGAGGGTGGTCAACGCTTTGACCCCTCCCTCTGTAACTCCAAACTCGTAGGAGCAAGGTACTTCAACAAAGGCCTTCTCGCAGCGCACGACGGTGATGATGTCACCAAAATCGGCGCCGACTCCGTTAGAGATAGCGTGGGACACGGGACTCACACAGCGTCCACGGTCGCGGGAAACTACGTGAGGGGCGCGTCGTATTTCGGTTACGCCAAGGGCACGGCAAGAGGAATTGCGCCACGTGCTAAAATTGCGATGTACAAGGTTGCGTGGGCCCAAGGCGTGTTTGCCTCGGACATGCTCGCAGGTTTGGACCAGGCAATCGCTGACGGAGTGGACGTCATTTCCATCTCAATGGGTTTCGACATGGTGCCCTTGTACGAGGATCCTGTCGCAATCGCCGCTTTCTCTGCTTTGGAGAAAGGCGTGGTGGTTTCAGCCTCTGCGGGAAACGCAGGTCCGTTTCTGGGGTCCATACATAACGGGATTCCTTGGGTTTTAACGGTTGGAGCGAGCAACACAGAGCGTTCTTTTGGCGGCACGTTAATTCTGGGAAACGGGAAGAGGTTTTCGGGGTGGACTGTGTTCCCAGGAAGTGCCACGGTGAATAACCTTCCTCTGGTTTACCATAACAAGGCTTCGGCGTGTGACTCTTCTACACTGTTGTCTCAAGTGGCACGCGGCAGCGTCGTCATATGCGATTCTGTTATGGATGTTAACCAGCAGATTCAGCACGTCTCATTGTCTCAAGTGTATGGAGCTGTGTTTATATCCGCTGATCCCACTCTGTTCGAAAAGGGAAAAATGACGTTTCCGGGCCTTGTTATTAGCCCTCACCAAGGCCAAAATGTGATCGAATATGCACGCGCCACTCCACTCGCTTCCGCCACCATAAAGTTTCAAGAAACCTACGTTGGAACCAAACGGGCTCCCACGGTGGCCAGTTACAGTTCCAGAGGCCCGTCTTGGGAGTGTCCGTGGGTATTGAAGCCCGACGTTATGGCTCCCGGGTCGTCGATATTGGCGGCTTGGGTTCCGGACTTGCCTGCGGCCCAAATTGGCCCAAACGTGCTTCTAAATAATGAATACAATTTGTTGTCGGGGACGTCGATGGCTTGTCCCCATGCTTCCGGGGTGGTGGCTCTGTTGAGGAATGCACACCCTGAGTGGAGTGCTTCGGCTGTTAGGTCCGCCCTGACAACTACGGCCAGCCCACTTGATAACACAGGAAAGCCCATTGAAGAAAATGGAGAACTCTTTCAACGGGCTTCTCCTCTAGCCATGGGCGCTGGCTTGATTGACCCCAACCGTGCCCTTGACCCAGGTTTGATTTATGACGCCACCCCTCAAGATTATGTTAACCTCCTCTGTGCTATGAATTTCACCCAGGCCCAAATCTTGGCCATTACTAGATCAAAGGACTATAATTGCTCAAGCCCATCTTACGACGTCAATTATCCCTCTTTCGTGGCTTTTTCTGTTGACAAGAGTGTGGCAGTGGAGAGAAAATTCCGCAGAAGTGTGACGTACGTTGGAGATGGTTCAGCTGTTTACACTGCACGTGTGAGCTCGTCTAATGGCACACAAATCTCAGTTTCTCCCAATAGGTTGGTCTTCAAGGCAAAATATGAGAAACGGAAATTCAGTTTGATGTTGAAGTCTGAAATGAAGAAGGAAAATGTTGTACCTTTTGGTTCACTGGAATGGGTTGAAGAAACAGGAAGGCATGTTGTTAGGAGTCCCCTTGTGGTGCTACCTTCCACCTTTGTCTTCAACCACTAA 2298 0.5035 MSKTMKRVNPFCLSHIIVALSMVCLVWQCNSKAVTYIVHMDKSYMPKVFTSHRHWYSSTLTSLDSTQHVNSSILYSYENALHGFSVALSPQQLESLKETPGFISAYRDRATTLDTTASYAFLSLNISHGLWPASNYGQNVVVGVVDSGIWPESDSFKDDGMVIQTPPKWKGKCEGGQRFDPSLCNSKLVGARYFNKGLLAAHDGDDVTKIGADSVRDSVGHGTHTASTVAGNYVRGASYFGYAKGTARGIAPRAKIAMYKVAWAQGVFASDMLAGLDQAIADGVDVISISMGFDMVPLYEDPVAIAAFSALEKGVVVSASAGNAGPFLGSIHNGIPWVLTVGASNTERSFGGTLILGNGKRFSGWTVFPGSATVNNLPLVYHNKASACDSSTLLSQVARGSVVICDSVMDVNQQIQHVSLSQVYGAVFISADPTLFEKGKMTFPGLVISPHQGQNVIEYARATPLASATIKFQETYVGTKRAPTVASYSSRGPSWECPWVLKPDVMAPGSSILAAWVPDLPAAQIGPNVLLNNEYNLLSGTSMACPHASGVVALLRNAHPEWSASAVRSALTTTASPLDNTGKPIEENGELFQRASPLAMGAGLIDPNRALDPGLIYDATPQDYVNLLCAMNFTQAQILAITRSKDYNCSSPSYDVNYPSFVAFSVDKSVAVERKFRRSVTYVGDGSAVYTARVSSSNGTQISVSPNRLVFKAKYEKRKFSLMLKSEMKKENVVPFGSLEWVEETGRHVVRSPLVVLPSTFVFNH* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1140 765 CDD Peptidases_S8_3 112 576 IPR034197 -
Pvu6g1140 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 114 IPR037045 -
Pvu6g1140 765 SUPERFAMILY Subtilisin-like 124 615 IPR036852 GO:0004252|GO:0006508
Pvu6g1140 765 Pfam Peptidase inhibitor I9 35 112 IPR010259 -
Pvu6g1140 765 Gene3D Peptidase S8/S53 domain 139 624 IPR036852 GO:0004252|GO:0006508
Pvu6g1140 765 Gene3D - 347 477 - -
Pvu6g1140 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Pvu6g1140 765 CDD PA_subtilisin_like 353 470 - -
Pvu6g1140 765 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 26 756 - -
Pvu6g1140 765 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Pvu6g1140 765 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Pvu6g1140 765 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Pvu6g1140 765 Gene3D - 628 757 - -
Pvu6g1140 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 756 IPR045051 -
Pvu6g1140 765 Pfam Fibronectin type-III domain 655 756 IPR041469 -
Pvu6g1140 765 Pfam Subtilase family 137 579 IPR000209 GO:0006508|GO:0008236
Pvu6g1140 765 ProSiteProfiles Serine proteases, subtilase domain profile. 118 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1140 Pvu-Chr6 22519688 22522216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1140 24 756 Subtilisin-like Serine Gene Family AT5G67360 42.725 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1140 - - ccaj:109796640 1207.97