Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1137 ATGAATTGTTTTCCGTGTTTTTCAAAGACTAAGAAATGCAATAGCAAGAGGGAGCAGCTAGGGCTTTCAGCACAAGAAAACGTTATAGCAACAAGAACACCTCAGGATGTAAAGAAACAAAAGGCAGATGATGCAAACAATGTCGACACCTCAAATATTCAAGCACAAAATTTCACGTTCCGTGAGCTAGCAATTGCAACAAAGAATTTTCGGCAAGAATGCTTGATGGGTGAAGGGGGCTTTGGCAGAGTTTACAAGGGAACCATTCCTGCAACCGGGCAGGTGGTAGCAGTGAAACAACTCGACCGAAATGGAGGGCAAGGAAGTAAGGATTTTCTAGTTGAGGTTTTGATGTTAAGCCTCTTAAACCATGAAAACCTCGTCAAACTCACTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTGTATGAGTTCATGGGAGGTGGCTCTTTAGAAGGCCTTCTTCTTGGGAGGAAAACAGATGAACCGCCATTAGATTGGTATAGCAGAATGAAAATAGCATCACATGCCGCGAAAGGACTATGGTACTTGCACGATAAGGCCAACCCTGCAATTATATATCGGGACTTGAAATCTTCGAACATCTTGCTGGATGATGATTTCAATGCAAAACTATCAGATTATGGATTGGCCAAACTTGCTGGCAAAGATAAGATGAACATTGTCCCCACAAGAGTAATGGGCACTTATGGTTACAGTGCTCCTGAGTACGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTCTACAGTTTTGGAGTTGTCCTGCTAGAGCTCATTACTGGACGACGTGCGGTTGACACCACAAGAACACACGATGAGCAAAATCTAGTTTCATGGGCACAACCCATATTTAGGGATCCAAAGAGATATCCAGATATGGCAGATCCAAATTTGAACAAAGATTTCCCAGAAAAGGATCTTAACCAAGCTGTTGCAATTGCAGCCATGTGCTTGCAGGAGGAAGCAGCAGCTCGTCCTTTGATGAGTGATGTTGTAACTGCTCTCAGTTTTCTATCCACCGCTACTCCAGAGGGTGAGGGTGAAGGTGATGCCGCTGAAAATGACTGTTGTAGCTTCTCCGGTGAAGATAGTTCTTCTAGCGAAGACAATGGAACTGCTAAAAACCAGGTTAGTGCAAAATACCAAGAAAGTGAAGACGCCTCAGAATCTGAGTATGATTATTATGAGAATGAAAACCAACATAATTACAGTCCTCAAGACACTGAAGAGACCAAGGAGTTCTACTCCAAATCGAGCCGCAAGAGCAGCACCAAATCAAAGAATGGAACCGCTTCCTCTATCCAAAGAAGCAGCTCCAATTCAGATTCAGAACATGGACGTGTCTCAATCGGCCGCAAAAGCAGTAGGAAAAGTAGGAAAGAGAAATCTTCATTAAACCAGAGGAGCAGTAAGAAATCTTCTTTGAAGCAAAAGAGCAACAAGAAATCTTCTGTCAAAGTATTAAGCAACAAGAAAAGCCATTCATCCAATTCAAGCAGCAGTGGAACGTTACAACATGATGGTGTTGATGTTATTGACCGTAGCGGAAGCCGGCCATCAGAAGGGAACATTTCAATTGGCCTAATTAGTAGTGAGAGTGTTCACTCAGACAATGACAGCAGCATAAGGTCCAAGGAAAGGAGCAGCATGCATTTAGATTATACCAAAAGCCAGGAATCATAA 1710 0.4287 MNCFPCFSKTKKCNSKREQLGLSAQENVIATRTPQDVKKQKADDANNVDTSNIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGGQGSKDFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMGGGSLEGLLLGRKTDEPPLDWYSRMKIASHAAKGLWYLHDKANPAIIYRDLKSSNILLDDDFNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTRTHDEQNLVSWAQPIFRDPKRYPDMADPNLNKDFPEKDLNQAVAIAAMCLQEEAAARPLMSDVVTALSFLSTATPEGEGEGDAAENDCCSFSGEDSSSSEDNGTAKNQVSAKYQESEDASESEYDYYENENQHNYSPQDTEETKEFYSKSSRKSSTKSKNGTASSIQRSSSNSDSEHGRVSIGRKSSRKSRKEKSSLNQRSSKKSSLKQKSNKKSSVKVLSNKKSHSSNSSSSGTLQHDGVDVIDRSGSRPSEGNISIGLISSESVHSDNDSSIRSKERSSMHLDYTKSQES* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1137 569 MobiDBLite consensus disorder prediction 547 569 - -
Pvu6g1137 569 Pfam Protein kinase domain 72 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1137 569 MobiDBLite consensus disorder prediction 351 569 - -
Pvu6g1137 569 MobiDBLite consensus disorder prediction 367 392 - -
Pvu6g1137 569 MobiDBLite consensus disorder prediction 430 454 - -
Pvu6g1137 569 ProSiteProfiles Protein kinase domain profile. 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1137 569 MobiDBLite consensus disorder prediction 527 546 - -
Pvu6g1137 569 MobiDBLite consensus disorder prediction 489 515 - -
Pvu6g1137 569 SMART serkin_6 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1137 569 CDD STKc_IRAK 76 344 - -
Pvu6g1137 569 MobiDBLite consensus disorder prediction 412 429 - -
Pvu6g1137 569 Gene3D Transferase(Phosphotransferase) domain 1 147 362 - -
Pvu6g1137 569 Gene3D Phosphorylase Kinase; domain 1 30 146 - -
Pvu6g1137 569 PANTHER OS07G0668900 PROTEIN 1 548 - -
Pvu6g1137 569 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 548 - -
Pvu6g1137 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Pvu6g1137 569 SUPERFAMILY Protein kinase-like (PK-like) 50 347 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1137 Pvu-Chr6 22498726 22501362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1137 1 354 Glycoside Hydrolase AT3G07070 65.289 3.10e-165 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pvu6g1137 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1137 - - gmx:100807682 785.793