Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1136 ATGAAAACGAAAGTCCACTTACCTCGCTACCTTTTGTTTGCACTTCTATTTCTTGCACCATTCCCACACTCCTCCCCACTCCTTTCGTCTCCTGCATTTTCTCTTCCACAAGGTTCATGTGTGCTGAAGTTCAACACAAGCCAATATGTGGCATTTGGTGAGTGCATCGGTGTGAAAGAGAGTATTTACATGTGGGGTGAGGATGGGTTCCCGACCACGTTGTGCTGTCGAAATGCTCTCACGATTTTGTCCAATGCGTTGGCTTCACAAGCACTGAACTCGGGAGGAAGAGTGTTCCTTTCCCAAGATCAATGGCAGAGTTGTTCCCAGTCATTTCACCCGCAACAAGGGATGTCACTTGATTCATGTGGCTTTGACAACTTCTACCGAGGCAGTTCCCCATGCTCCGACTTGATTTTGCAGGATGTTAGGACCCTGCAACAATATCCAGACACATTGAGCCGGTGCTCCCACTTCAACCAACGTTTTGATCAATCTTGTGCAGATTGTACCAGTGGAATATTGAGCGTGAGAGATACTTTATATTCTCAATTTGCCAACAACAACAACGACACTGACAGAGCCATATGTGGGGTGGCAGCTATTATTGCTCTTGCAGCTGGTAGACCAAACGATCCTCTAGTTGACAAATTTTTACGATGCTTGCCACCTTCAGCCTCAGGATCAGACAAGAGATCTCTGTGGAAAGCCTTGCTGAGTGTGCCAGTAGTTGTGATTGTAATATTGCTTGTGGTTATTATGGTCAAATGTTTGTCCAAGAAGAAGGGTCGTAGACAGGTTGACTTGAAAGAGATCACTGCATGGTCTGGATTGTACTGGTTCTGCAAAAGGGAAATTGAGAATGCCATGAATTATGGTGGTCGAAAGATAAGCCTTGGACGTGGAAGTGCAGGGCAGGTATATAGAGGCGTTCTACCCAGTGGTCAAATCGTGGCCATCAAGCATTTAACAAAGAGTAACACCTCTGAGTCTTTCACGCGAGAAGTTGAAGGCCTTTCAAGGCTTCGCCATCCAAACTTGGTTTGCCTCTTTGGGTGCTGCATTGAAGGGGATGAGAGATATTTAGTCTATGAATTTTGTGCAAACGGGAATCTTGCTCAACATCTCTTAAGAAGAGATAGTCACTTGAGTTGGGAAACAAGAGTGAGAATTTTGAGAGATTGTTCATTTGCACTCAAGTACCTCCACCATCATATGGAAGGCTGTGTAGTCCATAGAGATATAAAGCTTACGAACATTCTTTTGACTGAGAAATACCAAGCCAAACTGTCAGATTTTGGACTGTCAAAGGTGATGGGAATCAAAGAGAGCAAGGTTTTTACCGATGTAAGAGGAACCATAGGCTACATGGATCCAGAATACATGAGTAATGCCAAGCTAACATGTGCCAGTGATGTATACAGTTTTGGTATTGTTGCTTTGCAAATATTGTCTGGACAGAAAGTCATAGAGTTGGATCTTGATGCCAGAGATCAGCTCACTAGGAAGGCAAGAGATGTGAGTATGGGAAAGCGTCCATTGTCTGATTTTGAAGACCCAAGGCTAAAAGGAAAGGTTGATAAGGCAGACTTTGAAGCCATCCTACAAATTGCAGTGTTGTGTGTTGCAAAATCAAGCAAAGGTCGCCCTACCATTGAGGTTGTTTTTGAAGAATTGGACAAGGTCTGCATGGACACAGAAACCAAGATGAAGACAAAGAAGGATGAGAGCTCATCAACAACATCCACCCCCAGCTCCAAATCCTCCAGATCAGCTCATCTTTGA 1785 0.4426 MKTKVHLPRYLLFALLFLAPFPHSSPLLSSPAFSLPQGSCVLKFNTSQYVAFGECIGVKESIYMWGEDGFPTTLCCRNALTILSNALASQALNSGGRVFLSQDQWQSCSQSFHPQQGMSLDSCGFDNFYRGSSPCSDLILQDVRTLQQYPDTLSRCSHFNQRFDQSCADCTSGILSVRDTLYSQFANNNNDTDRAICGVAAIIALAAGRPNDPLVDKFLRCLPPSASGSDKRSLWKALLSVPVVVIVILLVVIMVKCLSKKKGRRQVDLKEITAWSGLYWFCKREIENAMNYGGRKISLGRGSAGQVYRGVLPSGQIVAIKHLTKSNTSESFTREVEGLSRLRHPNLVCLFGCCIEGDERYLVYEFCANGNLAQHLLRRDSHLSWETRVRILRDCSFALKYLHHHMEGCVVHRDIKLTNILLTEKYQAKLSDFGLSKVMGIKESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFEDPRLKGKVDKADFEAILQIAVLCVAKSSKGRPTIEVVFEELDKVCMDTETKMKTKKDESSSTTSTPSSKSSRSAHL* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1136 594 Gene3D Phosphorylase Kinase; domain 1 254 366 - -
Pvu6g1136 594 ProSiteProfiles Protein kinase domain profile. 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1136 594 MobiDBLite consensus disorder prediction 567 594 - -
Pvu6g1136 594 Pfam Protein kinase domain 298 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1136 594 SUPERFAMILY Protein kinase-like (PK-like) 279 559 IPR011009 -
Pvu6g1136 594 SMART serkin_6 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1136 594 PANTHER OS01G0253100 PROTEIN 50 573 IPR045271 GO:0004714|GO:0006468
Pvu6g1136 594 Pfam SPARK 36 193 IPR043891 -
Pvu6g1136 594 Gene3D Transferase(Phosphotransferase) domain 1 367 588 - -
Pvu6g1136 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Pvu6g1136 594 MobiDBLite consensus disorder prediction 577 594 - -
Pvu6g1136 594 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 50 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1136 Pvu-Chr6 22492533 22497265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1136 299 582 Receptor kinase-like Gene Family AT1G51800 41.581 3.06e-56 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pvu6g1136 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1136 - - gmx:100807158 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1136 6 22492533 22497265 Pvu10g1075 10 36030674 36034321 PCT