Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1128 ATGCGCTCAAAGTATTCGCCTTGGTACAGGAATAAAATGGAGTCAAATAAGCAGTGGAAGGAAGGATCAAGAATTTCAGCACTGATTGTGGATGACGATGCTATGATTCGGAAAATCCACAAGGCGATGTTGGAGCGGTTATTTAACATGGACGCGAAAACGGTTAATGATGGAAAGGAAGCAGTGGAACTCTATCGATGTGGGGCGAATTTTGACATTATTTTCATGGACAAAGAAATGCCCATCATGGATGGTCACGAGGCCACAAAAGAGCTACGTGGAATGGGTGTTAAGAGCTTGATAGTGGGAATTACTACGCGTGCTGATGGAAAAGATACTGAAGAATTTTTAGGTGCAGGATCCAACTATTGCTTTGAAAAACCTCTTGATCGAACAAAGGTTGAACAAGTCTTGCAAGACCATCCACATTTTACAACTTGA 441 0.4195 MRSKYSPWYRNKMESNKQWKEGSRISALIVDDDAMIRKIHKAMLERLFNMDAKTVNDGKEAVELYRCGANFDIIFMDKEMPIMDGHEATKELRGMGVKSLIVGITTRADGKDTEEFLGAGSNYCFEKPLDRTKVEQVLQDHPHFTT* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1128 146 Gene3D - 5 143 - -
Pvu6g1128 146 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 11 140 - -
Pvu6g1128 146 SMART REC_2 25 138 IPR001789 GO:0000160
Pvu6g1128 146 SUPERFAMILY CheY-like 23 141 IPR011006 -
Pvu6g1128 146 Pfam Response regulator receiver domain 28 138 IPR001789 GO:0000160
Pvu6g1128 146 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 140 - -
Pvu6g1128 146 ProSiteProfiles Response regulatory domain profile. 26 142 IPR001789 GO:0000160
Pvu6g1128 146 CDD REC_hyHK_CKI1_RcsC-like 28 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1128 Pvu-Chr6 22417894 22421820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1128 25 134 Response Regulator Gene Family AT3G04280 46.429 2.03e-27 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu6g1128 Response_reg 3.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1128 - - pvu:PHAVU_006G107500g 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1128 6 22417894 22421820 Pvu6g1128 6 22417894 22421820 ECH