Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1111 ATGCACCAAGAAGAAGCAGCTCTCATGAAACAACAATACGAAGCGTTGGAAGAAATCGGTCGCGGCAAATTCGGCACCGTCTTCCGCTGCTTCCACCCCTCATCCAACCAATTCTACGCTCTCAAAGTCATCGACAACGGCCTCCTCAGCGACGCCACCGACCGCCACTGCCTCGAAGTAGAGGCCAAGGCCATGACCTTCCTCTCTCCCCACCCCAACATTCTCGAAATCATCGACACCTTCCAAGATGCCCAAACCTCCACCATCGTTCTCCCGCTCTGCCAGCCCCGCACCCTCTTCGAGCACATCGCCGACGGCCCCCTGCCGGAGTCCCACGCCGCCTCCCTCGCCAAGCAGCTTCTCGAAGCCCTCACGCACTGCCATGAGCTCGGAGTCGCCCATAGAGACATCAAACCCGAAAACCTCTTATTCGACGAAGCCGACAACCTTAAACTCTCCGACTTCGGCTTCGCAGAGTGGTTCGGTGAGGGCAGGACCATGAGTGGCTTGGTGGGCAGCCCTTATTATGTGGCTCCTGAAGTTCTCATGGGGAAGGACTACGACGAAAAAGTTGATGTTTGGAGCAGTGGGGTCACTCTTTACGCCATGTTGAGTGGCATTCCACCCTTCTATGGAGACTCTACTGAAGAAATTTTTGAAGCTGTTCTAAGGTCTAATCTTCGGTTTCCTACCACAAATTTTAGGTCTGTGTCTTCTTCTGCTAAGGATCTTCTTAGGAAGATGATTTGTAGAGATCCCTCTAGACGTATCTCTGCACACCAAGCATTGAATCATCCTTGGATTTTGAGTGCTGATCTTTCTTGA 825 0.5261 MHQEEAALMKQQYEALEEIGRGKFGTVFRCFHPSSNQFYALKVIDNGLLSDATDRHCLEVEAKAMTFLSPHPNILEIIDTFQDAQTSTIVLPLCQPRTLFEHIADGPLPESHAASLAKQLLEALTHCHELGVAHRDIKPENLLFDEADNLKLSDFGFAEWFGEGRTMSGLVGSPYYVAPEVLMGKDYDEKVDVWSSGVTLYAMLSGIPPFYGDSTEEIFEAVLRSNLRFPTTNFRSVSSSAKDLLRKMICRDPSRRISAHQALNHPWILSADLS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1111 274 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1111 274 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Pvu6g1111 274 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1111 274 CDD STKc_CAMK 12 267 - -
Pvu6g1111 274 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1111 274 Gene3D Transferase(Phosphotransferase) domain 1 3 273 - -
Pvu6g1111 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pvu6g1111 274 SUPERFAMILY Protein kinase-like (PK-like) 8 270 IPR011009 -
Pvu6g1111 274 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 9 271 - -
Pvu6g1111 274 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1111 Pvu-Chr6 22238357 22239435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1111 2 268 EF-hand Containing Proteins AT1G50700 39.568 3.01e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu6g1111 Pkinase 7.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1111 - K08794 gmx:548089 393.275