Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1091 ATGGGGACTCCGGTGAATATTACTGCGGGTTCTTTTGTCTGGGCTGAAGATCCAGAAGTATCTTGGATTGATGGACAGGTATCAAAAATCAAGGGAAATGATGTTGAAATTGACACAACCAATGGAAAGAAGGTGCTCACAAAGTTATCAAAAATATATCCCAAAGATATGGAAGCTCCTGCGGGTGGAGTGGATGATATGACTAAGCTTTCCTATTTGCACGAGCCTGGAGTCCTTCAGAACTTAAAAATTAGATATGAATTGAATGAAATATATACTTATACTGGTAATATTCTGATTGCAATAAATCCATTCCAAAGGCTACCTCATATTTATGATTCACACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTAAGTCCTCATGTATTTGCCGTAGCTGATGTTGCATATAGGGCAATGATACACGAAGGAAAAAGCAATTCAATTTTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATATCTTGCCTTCTTAGGTGGTAGGGCTGCCACTGAAGGACGAACCGTTGAGCAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAGTGGTAGAATCTCGGGAGCAGCTATTCGAACATACCTTTTGGAGAGATCTCGGGTTTGCAAGATTAGTGATCCTGAACGCAACTACCACTGCTTTTATTTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCTAAAACGTTTCATTACCTGAACCAGTCAAAATGCTATGACCTGGCTGATATAAATGATTCTCGTGAGTATCTTGCTACCAGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCGATTCTTCATATTGGGAATATTGAGTTTGCAAAAGGCAAGGAAATTGATTCATCAGTTCCAAAAGATGACAAAGCCAAATTCCACTTAGAAACTACTGCTGAGCTTCTTATGTGCAATGCTGGTTCCTTGGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAGGAAGTTATAAAACGAAGCCTCGATCCCCAAAGTGCAGCAGTGAGCAGAGATGGCTTGGCAAAAACAATTTATTCTAGGCTCTTTGACTGGTTGGTGAACAAGATTAATAATTCAATTGGACAAGACTCCAGTTCTAAATCTTTGATTGGGGTGCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAACGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAGATGGAGCAAGAAGAATACACGAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATAATTGCACTCCTTGATGAAGCTTGTATGTTTCCAAAGTCCACACATGAAACATTTTCAAACAAACTTTATCAAACATTTAAGAATAACAAACGCTTTATTAAGCCAAAATTATCTCGAACAGATTTCACTATTTCTCATTATGCTGGCGAGGTGCACTATCAGTCTGATCAGTTTCTGGACAAAAACAAAGATTATGTGGTTGCTGAGCATCAAGATTTATTGACTGCTTCCAAATGTCCATTTGTAGCAGGCCTTTTTCCTCTACTTCCAGAAGAGACATCCAAATCTTCTAAATTTTCTTCAATTGGTTCTCGATTTAAGCTGCAACTACAGCAATTAATGGAAACACTAAGCTCTACAGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATTCCAATATTATGCAGCAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCTTTCTTTGAATTTATACACCGATTTTCCCTTCTTGCTCCAGAGATCACAGAAGCACATCATGATGAGAAGACTGTTTGTCAAAAGATTCTGGAAAAAGCACGGCTTAAAGGATATCAGATTGGACAAACAAAGGTATTCCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACAAAGAGCTCAAATGCTTGGTAATGCAGCAAAAACTATTCAACGGCGTATTCGAACCCATCAAGCTCGTAAACATTATCTTGCACTACGCAAGAAGACTACAATTGTGCAGTCTCTTTGGAGAGGAAGACTTGCATTCAAATTCTATAAGAACTTGAGAAGGGAGGCAGCTGCAGTGAAAATTCAGAAGAATATACGCAGATATGAATCTAGGAAAACCTATACTAAACTCAAAGCATCAGTACTTACTGTGCAAACAGCTTTAAGGGCAATTGCTTCTCTCAAGGAGTTCAGATTTAGGAAACAGGCTAAGGCTTCCATCATTATTCAGGCTCAGTGGCGGTGCCACAAATCTGCTTCATATTATAAGAAGCTCAAGAAAGGTTCAATTGTCACACAATGCCGATGGAGGGGTCTAATGGCCAGGAGAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGTGCACTTAAAGAGGCAAAGGACAAGCTTGAAAAAAGAGTGGAGGAACTCACTTGGCGTCTTCAACTAGAGAAGAGTTTAAGGAGCAACCTAGAAGAATCCAAAGCACAAGAGATAGCAAAACTGCAGAATTTACTGCAGGAGACGCAGAACAAAGTTGATGAAACCAATGCATTGCTTATAAAGGAGCGAGAGGCTGCAAGGAAAGCTATTGAAGAAGCACCTCCTGTTGTTCAAGAAACTCAGGTTATTGTTGAAGACACTCAGAAGATTGAATCACTATCATTGGAAATTGAGAGTCTAAAGACCTCCCTTGAGTCAGAGAAGCAGAAAGTTGATGACTTTGAAATGAAATATAATGAGTCCCAAGCTTATTGTGAAGAAAAGAGTAAAATATTAGAAGACACGGAGAAGAAGGTTCGTCAGCTACAAGAATCCTTGACCAGACTAGAAGAGAAGATTGCTAATTCAGAATCAGAGAATCAAGTTCTACGTCAACAAGCTGTGTCAATGGCACCCAATAAGTTCCTCTCAGGACGCTCTAGATCTGTTATACAGCGACCGGATGGTGGACATATTGGAACGGAAGTAAAGCCAACTTCGGATATGCATAGCACATCAATGAACCACAGGGAACAGACCGAAGTGGAGGATAAACCACAGAAATCACTCAATGAGAAACAACAGGAGAACCAAGAGTTGCTCATTAGATGCATTGCACAAAACCTAGGCTTTGCTGGGAATAGACCAGTTGCTGCTTGTATCGTATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTGGACCGTACTAGCGTTTTTGATCGTCTAATCCAAACTATTGGTCACGCAGTTGAGACGCAGGATAATAATGATGTCTTGGCTTATTGGTTATCCAATTCCTCTACACTTGTCTTGTTACTACAGCGCACACTAAAGGCAAGTGGTGCGGCTGGAATGGCTCCTCAACGTCGTCGATCTTCATCAGGGAGTCTGTTCGGGAGGGTGACACATAGTTTCCGTGGAACTCCAGCTGGAGTCACCCTTCCCCTAATCAATGGTAGCATGAGCGGTGTAGATACGTTAAAAGTTGAAGCCAAGTACCCTGCTCTCCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATTAGAGATAACTTGAAGAAAGAAATTTCTCCCCTGCTTGGATTATGCATCCAGGCACCCAGAACATCTAGAGCGAGCTTGGTGAAGGGATCATCACGTTCGGTTGCAAACACTGAAGCCCAGAAAGCTTTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTTGGGAACTTCTTAAATACTTTGAAAGAAAATCATGTTCCCCCGTTTTTGGTTCGTAAGGTGTTCACTCAAATATTTTCTTTCATCAATGTCCAACTTTTCAACAGTCTTCTTCTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTGAAATCTGGTTTGGGGGAATTGGAGGATTGGTGCTGTGGCGCCACTGATGAGTACTGTGGTTCGGCATGGGATGAGCTCAGACATATAAGACAGGCTATTGGATTTTTGGTCATACATCAGAAACCAAGGAAAACGCTGAATGAAATAAGTCATGACCTGTGCCCAGTCCTCAGCATACAGCAGCTATATCGGATTAGCACCATGTACTGGGATGACAAATATGGCACACATAGCGTATCCGCTGATGTTATATCCAATATGAGAGTGTTGATGACTGAAGATTCTAATAACGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTCTCTGTTGATGACTTAGCAAAGTCGAAGGAACTGATCGATGTCTCTGATTTAGAGCCCCCACCACTATTACATGAAAACACTGGCTTTAGTTTTCTGTTGCCACGCCCAGACGGACAGATTTCCTAG 4596 0.4095 MGTPVNITAGSFVWAEDPEVSWIDGQVSKIKGNDVEIDTTNGKKVLTKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAVADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCKISDPERNYHCFYFLCAAPQEEIEKYKLGNPKTFHYLNQSKCYDLADINDSREYLATRRAMDIVGISQKEQEAIFRVVAAILHIGNIEFAKGKEIDSSVPKDDKAKFHLETTAELLMCNAGSLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVNKINNSIGQDSSSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNNKRFIKPKLSRTDFTISHYAGEVHYQSDQFLDKNKDYVVAEHQDLLTASKCPFVAGLFPLLPEETSKSSKFSSIGSRFKLQLQQLMETLSSTEPHYIRCVKPNNLLKPAIFENSNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFIHRFSLLAPEITEAHHDEKTVCQKILEKARLKGYQIGQTKVFLRAGQMAELDAQRAQMLGNAAKTIQRRIRTHQARKHYLALRKKTTIVQSLWRGRLAFKFYKNLRREAAAVKIQKNIRRYESRKTYTKLKASVLTVQTALRAIASLKEFRFRKQAKASIIIQAQWRCHKSASYYKKLKKGSIVTQCRWRGLMARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKSLRSNLEESKAQEIAKLQNLLQETQNKVDETNALLIKEREAARKAIEEAPPVVQETQVIVEDTQKIESLSLEIESLKTSLESEKQKVDDFEMKYNESQAYCEEKSKILEDTEKKVRQLQESLTRLEEKIANSESENQVLRQQAVSMAPNKFLSGRSRSVIQRPDGGHIGTEVKPTSDMHSTSMNHREQTEVEDKPQKSLNEKQQENQELLIRCIAQNLGFAGNRPVAACIVYKCLLHWRSFEVDRTSVFDRLIQTIGHAVETQDNNDVLAYWLSNSSTLVLLLQRTLKASGAAGMAPQRRRSSSGSLFGRVTHSFRGTPAGVTLPLINGSMSGVDTLKVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGNFLNTLKENHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLGELEDWCCGATDEYCGSAWDELRHIRQAIGFLVIHQKPRKTLNEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSADVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLAKSKELIDVSDLEPPPLLHENTGFSFLLPRPDGQIS* 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1091 1531 Gene3D - 833 882 - -
Pvu6g1091 1531 Gene3D - 785 832 - -
Pvu6g1091 1531 Gene3D - 734 784 - -
Pvu6g1091 1531 Gene3D - 439 623 - -
Pvu6g1091 1531 Gene3D Kinesin motor domain 65 662 IPR036961 -
Pvu6g1091 1531 MobiDBLite consensus disorder prediction 1092 1110 - -
Pvu6g1091 1531 ProSiteProfiles IQ motif profile. 831 858 IPR000048 GO:0005515
Pvu6g1091 1531 CDD MYSc_Myo11 76 720 IPR036018 -
Pvu6g1091 1531 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Pvu6g1091 1531 PANTHER MYOSIN-9 7 1524 - -
Pvu6g1091 1531 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Pvu6g1091 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 785 IPR027417 -
Pvu6g1091 1531 PANTHER MYOSIN 7 1524 - -
Pvu6g1091 1531 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 Coils Coil 1010 1051 - -
Pvu6g1091 1531 Coils Coil 975 1002 - -
Pvu6g1091 1531 Gene3D - 252 310 - -
Pvu6g1091 1531 SMART iq_5 757 779 IPR000048 GO:0005515
Pvu6g1091 1531 SMART iq_5 734 756 IPR000048 GO:0005515
Pvu6g1091 1531 SMART iq_5 853 875 IPR000048 GO:0005515
Pvu6g1091 1531 SMART iq_5 830 852 IPR000048 GO:0005515
Pvu6g1091 1531 SMART iq_5 782 804 IPR000048 GO:0005515
Pvu6g1091 1531 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 Pfam IQ calmodulin-binding motif 858 875 IPR000048 GO:0005515
Pvu6g1091 1531 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Pvu6g1091 1531 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515
Pvu6g1091 1531 Pfam IQ calmodulin-binding motif 833 852 IPR000048 GO:0005515
Pvu6g1091 1531 Gene3D - 667 733 - -
Pvu6g1091 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Pvu6g1091 1531 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 Pfam DIL domain 1346 1449 IPR002710 -
Pvu6g1091 1531 Coils Coil 877 950 - -
Pvu6g1091 1531 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 MobiDBLite consensus disorder prediction 1066 1111 - -
Pvu6g1091 1531 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Pvu6g1091 1531 CDD MyosinXI_CBD 1110 1493 IPR037975 GO:0007015
Pvu6g1091 1531 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu6g1091 1531 ProSiteProfiles Dilute domain profile. 1159 1470 IPR002710 -
Pvu6g1091 1531 SMART DIL_2 1345 1452 IPR002710 -
Pvu6g1091 1531 ProSiteProfiles IQ motif profile. 737 763 IPR000048 GO:0005515
Pvu6g1091 1531 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1091 Pvu-Chr6 22023242 22037256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1091 1 1527 Myosins gene family AT1G54560 80.903 0.0 2610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1091 K10357 - gmx:100816792 2630.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1091 6 22023242 22037256 Pvu6g1091 6 22023242 22037256 ECH
Pvu6g1091 6 22023242 22037256 Pvu7g1946 7 42553649 42568552 PCT