Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1079 ATGAGTTTCCGTTCAAAAGGTCCCTTGTTTCTTGTTTGTGTCCTTGTTTTGTTGAATGACATTCATGGTGCATGGAATGAGGAGCCAGGGTCTTTGATCTTGGGTTGTGGATTGGATGGAGGTGCCGAAGATGGTGATACAAGAAAATGGAGTCCTGATAAAAAGTTTTTGGGGACAGAAGGTGGTTCGATCACATCCAAAGCCTCTTACCAAGACCCTTCTCTTACGTCTGAGATTCCATACATGTCAGCGCGTATTTTCACATCTGAGTCAACATACACATTCCCCGTTAAACCTGACAAGCGTTATTGGCTCAGGCTCCACTTTTACCCCTCTCTTTATGGCAGTTTCGATCCCTCTGACGCATATTTCTCCGTGGCTGCAAATGGGGTTACCCTCCTCACCAATTTCAGCGCCTCAGTCACTTGTGAGGCTCTATCACAAGCTTATATTGACAGAGAGTATTCCCTTGCTCCTTTGAATTCAGATACCTTGACTCTCACTTTCAAACCTTCTGATAAATACAAGGGTGCATTCGCTTTTGTTAATGGCATTCAGCTTATCCAAATGCCCGATTTGTTTGATTCTGCAACATTGATAGGGTATGATGGCCAAACCATAGATCTGACAACCTCGAATTTGCAAACCATGTTTAGACTAAATGTTGGGGGGCAGTTCATATCTCCAGTCCAAGACTCTGGACTTACAAGGATGTGGTATGATGACACACCTTACCTTTATGGGTCAGCCAGTGGTGTGACCAACAAAGCTGAGAAGAATGTCACATTCGACTATCAGGGAATGGCAGAGTATATTGCTCCTCTTGATGTCTACTCCACATCTAGATCAATGGGGGGAGATAAAAATATCAACATGGGCTACAATCTCACTTGGAGCTTCCGTGTTGATACCAATTTCATGTATCTTGTAAGGTTACATTTCTGTGAATACTACTACTCCAAGATCAATGAGATTGTCTTCAAAATCTTTGTCAACAACCAAACGGCACAAGAGCAAGCCGATGTGATTGGGTGGTCAGGAGGCATAGGAGTGCCAACTTATAAGGACTACGTGATATATGTCGAAGATGGAAAGACTAATGACTTGCTCTGGCTTGCACTTCACCCCGACCCTGACACAAAGCCTGAGTTCTACGATGCCATACTCAATGGAGTGGAGATATTCAAGCTCAATGAGACAGACTTATCTGCTCCCAATCCTCTGCTTTCAGACATGCTCCTCAAAGAGCACCGGGAAGAGGAAGCTGGTGTTTTCACCCACAAATATATCCATCATTCTGTTATCGGTGGAGCTGCTGGAGGTGCTGCTGGTTTTGCTTTTATGGCTGTACTATGTGTTGCTGTGTACAACAAGAAGAAGAAAGAACCAGGGTCAGAGTCTCAAACTGGCTGGCTTCCCGTCTATTCGAACTCAAACTCTACCAAATCCAGCAAGTCTGGAAAGAGCAGTGCCAACTTATCCGCCATGTCTCAGGGTCTTTGCCGCTATTTCTCCTTGCAAGAGATAAAGCAAGCAACCAAGAGTTTTGATGAGTCCAACGTAATTGGGGTTGGCGGATTTGGGAAGGTTTACAAGGGTGTCATTGATAATGGAGTGAAGGTGGCAATCAAGAGGTCCAACCCACAGTCAGAACAAGGAGTTAATGAATTCCAAACGGAAATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTCTGCGAGGAAAATGATGAGATGTGCCTGGTTTATGACTACATGTCTCTTGGCACCATGAGGGAGCATCTTTACAAGGGTAACAAATCTATCTCTACTCTATCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAAAGGGCTTCACTACCTTCACACTGGGGCAAAGTACACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCTTGGATGAAAACTGGAATGCCAAGGTTTCAGATTTTGGCTTGTCAAAAACTGGTCCAAATATGAACAATGATGGTCATGTTAGCACTGTAGTGAAGGGTAGTTTTGGCTACTTGGATCCTGAATACTTCAGGAGGCAACAGTTGACCGAAAAATCTGATGTTTACTCATTTGGGGTTGTTCTGTTTGAAGCACTGTGTGCCAGGCCTGTTCTCAATCCTCACCTTCCAAAAGATCAGGTTAGTCTTGCTGAATGGGCATTGATTTGCAAGAAAAAAGGAACTCTAGAGGACATGATTGACCCTTGTCTCAAGGGAAAAATCAATCAAGAAAGCTTGAAGAAGTTTGTAGACTCGGCTGAGAAGTGTTTGTCTGATCATGGTGCTGATCGTCCCTCCATGAATGATCTATTGTGGAATCTTGAATTTGCTCTCAATCTGCAAGAAAATATTAATGGTCCGGGTGGTTCAACTCATTCTGCTCCTACTAAAGAAAGTGAGTTAGAAGATATAAGCCTGGGAGAAAACGACGTAGCACGCCACTACAAAAACTTGGGCCTCGGAAGTGATGTTGACATTAGCAACGATTCGACAGAGAATCAGCATGAAATCTTCTCACAACTTGTCAATCCGCAAGGACGATGA 2589 0.4372 MSFRSKGPLFLVCVLVLLNDIHGAWNEEPGSLILGCGLDGGAEDGDTRKWSPDKKFLGTEGGSITSKASYQDPSLTSEIPYMSARIFTSESTYTFPVKPDKRYWLRLHFYPSLYGSFDPSDAYFSVAANGVTLLTNFSASVTCEALSQAYIDREYSLAPLNSDTLTLTFKPSDKYKGAFAFVNGIQLIQMPDLFDSATLIGYDGQTIDLTTSNLQTMFRLNVGGQFISPVQDSGLTRMWYDDTPYLYGSASGVTNKAEKNVTFDYQGMAEYIAPLDVYSTSRSMGGDKNINMGYNLTWSFRVDTNFMYLVRLHFCEYYYSKINEIVFKIFVNNQTAQEQADVIGWSGGIGVPTYKDYVIYVEDGKTNDLLWLALHPDPDTKPEFYDAILNGVEIFKLNETDLSAPNPLLSDMLLKEHREEEAGVFTHKYIHHSVIGGAAGGAAGFAFMAVLCVAVYNKKKKEPGSESQTGWLPVYSNSNSTKSSKSGKSSANLSAMSQGLCRYFSLQEIKQATKSFDESNVIGVGGFGKVYKGVIDNGVKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMSLGTMREHLYKGNKSISTLSWKQRLEICIGAAKGLHYLHTGAKYTIIHRDVKTTNILLDENWNAKVSDFGLSKTGPNMNNDGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPHLPKDQVSLAEWALICKKKGTLEDMIDPCLKGKINQESLKKFVDSAEKCLSDHGADRPSMNDLLWNLEFALNLQENINGPGGSTHSAPTKESELEDISLGENDVARHYKNLGLGSDVDISNDSTENQHEIFSQLVNPQGR* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1079 862 PANTHER OS07G0166700 PROTEIN 19 849 IPR045272 GO:0004714|GO:0006468
Pvu6g1079 862 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 19 849 - -
Pvu6g1079 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Pvu6g1079 862 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Pvu6g1079 862 Gene3D Transferase(Phosphotransferase) domain 1 592 801 - -
Pvu6g1079 862 Pfam Protein kinase domain 517 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1079 862 CDD STKc_IRAK 522 790 - -
Pvu6g1079 862 MobiDBLite consensus disorder prediction 469 490 - -
Pvu6g1079 862 Pfam Malectin-like domain 35 396 IPR024788 -
Pvu6g1079 862 SMART serkin_6 516 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1079 862 SUPERFAMILY Protein kinase-like (PK-like) 491 792 IPR011009 -
Pvu6g1079 862 MobiDBLite consensus disorder prediction 462 490 - -
Pvu6g1079 862 ProSiteProfiles Protein kinase domain profile. 516 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1079 862 Gene3D Phosphorylase Kinase; domain 1 475 591 - -
Pvu6g1079 862 Gene3D - 213 398 - -
Pvu6g1079 862 Gene3D - 34 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1079 Pvu-Chr6 21927167 21930391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1079 32 862 Receptor kinase-like Gene Family AT3G51550 53.049 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu6g1079 Malectin_like 1.1e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1079 - - gmx:102659961 1405.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1079 6 21927167 21930391 Pvu7g1935 7 42456952 42460033 PCT