Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1075 GAAACCAGCATAAGCTTTATTAATCTTCCTTGTATGCCTAATGCTGATACTGATGATGGTATTACTCCACTTATTTCGGCTGTGGCAGCTGGTTCTCTGGCATGTTTAGAGATATTAATTCAGGCAGGTGCTAAAGTAAATATAAGTGCAGGTGGAGCAACAGCTTTGCACATTGCAGCTGATAATGGAAGTGTAGAACTAATAAATTGCTTGTTAAAAGCTGGAGCTGATCCTAATATCTCTGACGAGGATGGGGTCAAGCCAATACAGGTTGCTGCTGCAAGGGGCTCTGTAGGTGCTGTTGAGATATTGTTCCCTTTGACGTCCAAAGTGGATGCTTTTCCAACTTGGACTGTTGGTGGGATACTTGAGTATATGCAATCTGAAACTAACAAGCAACAG 402 0.4229 ETSISFINLPCMPNADTDDGITPLISAVAAGSLACLEILIQAGAKVNISAGGATALHIAADNGSVELINCLLKAGADPNISDEDGVKPIQVAAARGSVGAVEILFPLTSKVDAFPTWTVGGILEYMQSETNKQQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1075 134 ProSiteProfiles Ankyrin repeat profile. 19 51 IPR002110 GO:0005515
Pvu6g1075 134 Pfam Ankyrin repeats (3 copies) 14 82 IPR002110 GO:0005515
Pvu6g1075 134 ProSiteProfiles Ankyrin repeat profile. 51 83 IPR002110 GO:0005515
Pvu6g1075 134 SMART ANK_2a 51 80 IPR002110 GO:0005515
Pvu6g1075 134 SMART ANK_2a 19 48 IPR002110 GO:0005515
Pvu6g1075 134 SMART ANK_2a 84 113 IPR002110 GO:0005515
Pvu6g1075 134 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 14 134 - -
Pvu6g1075 134 SUPERFAMILY Ankyrin repeat 7 112 IPR036770 -
Pvu6g1075 134 ProSiteProfiles Ankyrin repeat region circular profile. 51 83 - -
Pvu6g1075 134 Gene3D - 5 109 IPR036770 -
Pvu6g1075 134 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 14 134 - -
Pvu6g1075 134 ProSiteProfiles Ankyrin repeat region circular profile. 19 48 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1075 22 91 C2H2 Transcription Factor Family AT5G12850 40.789 3.42e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1075 - - pvu:PHAVU_006G1024002 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1075 6 21910477 21911641 Pvu6g1075 6 21910477 21911641 ECH