Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1067 ATGGAAAGGGTGTTGTCAGTAGATGAAATATCGGAGCAATATTGGGTGGCAGCGAAGAAGGAATCATGCAAGTTAAAGTCAAACATGAACCGTAGTGAATCGGAATGGGCCTTTCAGCAGTTTCTGCAGGAAGCAGCTTCTCCTTCTTCATCTTCTTCTTCTGATGTTAAGGATCCCGACATAAACATTAACATCAACATCCCTGTAACTCTAAATGTTGATTCCCAGGATTACCAAACAATTCTTAAGACCAAGCTTAACCTCGCATGTGCTGCGGTCGCTTTGACTCGGGCAGTTCCTTCTGAAGTGGGATCGCAGGCTACCTTAAAAGATGCCAAAGAACCAACTGGGATTCCTTGCTCACATTCCCTGCAAAAGAAGCCTGCTGTTGCAGTGAGGCCAACAATAAGTGGATCATCAAGAGAACAATCAGACGATGAGGACGAGATTAGTATCACTGAAAACATGAATCCAACTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGAGAGTCTGCCAGACGCTCAAGAAGAAGAAAACAGGCTCATTTATCTGACCTGGAGACACAGGTCTCCCAATTAAGAGGAGAAAATTCTTCTTTGTTAAAGCGCTTAACGGATGTGAGCCAGAGATACAACAGTGCTGCAGTTGACAACAGAGTTTTGAAAGCTGATGTTGAAACATTAAGAGCTAAGGTGAAGATGGCTGAAGAGACAGTGAAAAGAATTTCTGGTTTGAGCCCCATGTTTCATGCCATGACTGAGATGTCATCAATAGAAATACCATTGTTTGATGAAAGTCCTTCTGAGACATCAGCTGGTGCTGCTGTTCCTGTGCAAGAAGACCCAAATCATCAACTTTGTCAAGCCACTTCTAACAATGGGTTTTCTTCAATTAAAACTGTGCAGCAGAATGTTACGGCAGTGGTTGGTGGGAACAAAACTGGGGGAGCAACTTCCCTGCATAGAGTTGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGATGAAGATTCACGCGGAGAGCAATAA 1038 0.4364 MERVLSVDEISEQYWVAAKKESCKLKSNMNRSESEWAFQQFLQEAASPSSSSSSDVKDPDINININIPVTLNVDSQDYQTILKTKLNLACAAVALTRAVPSEVGSQATLKDAKEPTGIPCSHSLQKKPAVAVRPTISGSSREQSDDEDEISITENMNPTDAKRVRRMLSNRESARRSRRRKQAHLSDLETQVSQLRGENSSLLKRLTDVSQRYNSAAVDNRVLKADVETLRAKVKMAEETVKRISGLSPMFHAMTEMSSIEIPLFDESPSETSAGAAVPVQEDPNHQLCQATSNNGFSSIKTVQQNVTAVVGGNKTGGATSLHRVASLEHLQKRIRGDEDSRGEQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1067 345 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 165 180 IPR004827 GO:0003700|GO:0006355
Pvu6g1067 345 Gene3D - 161 216 - -
Pvu6g1067 345 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 160 214 IPR004827 GO:0003700|GO:0006355
Pvu6g1067 345 SUPERFAMILY Leucine zipper domain 162 212 IPR046347 GO:0003700|GO:0006355
Pvu6g1067 345 MobiDBLite consensus disorder prediction 168 187 - -
Pvu6g1067 345 MobiDBLite consensus disorder prediction 102 157 - -
Pvu6g1067 345 PANTHER BASIC LEUCINE ZIPPER 63 1 341 - -
Pvu6g1067 345 PANTHER BASIC LEUCINE ZIPPER 63 1 341 - -
Pvu6g1067 345 Coils Coil 220 240 - -
Pvu6g1067 345 SMART brlzneu 158 222 IPR004827 GO:0003700|GO:0006355
Pvu6g1067 345 Coils Coil 171 205 - -
Pvu6g1067 345 Pfam Basic leucine-zipper C terminal 229 338 IPR020983 -
Pvu6g1067 345 Pfam bZIP transcription factor 161 212 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1067 Pvu-Chr6 21866846 21870121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1067 1 251 bZIP Transcription Factor Family AT4G02640 39.550 2.48e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu6g1067 bZIP_C 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1067 K25784 - gmx:778137 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1067 6 21866846 21870121 Pvu6g1067 6 21866846 21870121 ECH
Pvu6g1067 6 21866846 21870121 Pvu7g1926 7 42378455 42385747 PCT