Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1054 ATGGGAAAAGCCAGCAAATGGATCAGAAACTTCCTTCTGGGGAAAAAAGATGAGAAAATCAAGAAGATCGATGCATTCTGCTCCGAGGATCTTAAGTGTTCGGGAAGTCTGATTGTGAGTCCCAAAGTGAAGCGCAGATGGAGCTTTGGAAAACTAACAGGTGGAAGAATAACGAGCAAGATAGCAGCAGGGCATAAATTATCCAGGTCTTTTGACTCAGGCGAGTCAGCGAAACTGCAAATACAAGCCTTGTCGGAAAGAAAGACTTCAAGGCGTCGTCTTCCAACACCATTGCCAAGGACTTGTAAAGATAAAAACAAAGCTGCTACAAAGATTCAGGCTGGCTTTCGGTCATATTTGGCAAAGAGAGCATTGCATGCTTTAAGGGGATTAGTCAAGTTACAAGCACTAGTGAGGGGTCACCTTGTGAGGAAACAAACAACTGCTACCCTGCGTGGCATGCATGCGCTGATGGCCATACAAGTTAGAGCGCGAATTCACAGAATTCAAATGGCAGAGGAAGTAAACCTGCTTGGAAAACAGCCTCCACAACATAGAGAAGTTCCACAGTTCAGAGATCTCATAACAGAAGAAAATAAAGATTCAAAGGATATGAGTGTGGAAGAAATGTTGGAGGTTTTGAGAAGCAGAAGTGGCCCTCTAGATGGTTATGTCAAGGCCAGAGAACGTGATTCCATGACATTCTATTCCAAGCATGTTCCGGTTGTTTCCAAACGAAAAATTCAATACAAGAATACTCAAATCGTAGAACCAAACAGCCCAGAAAACTTCCTGGTCATGTCTGAATTCAACACAATGGCAATGGCCACCTCATCAACTTCTCAGCGTCACTCAGTGCCTCACCGCCAATCACTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCTAAAGTAAGGTCGCAGAGTGAACCAAAACAACGACCCAAACGGGGAATGAGACACAAAGGCAAGTCTGTGGAATCCCCGTTGAATGGTCCAAGACAAAATCTTTTCTCAAACTCATTACGTTTCGATCGTGGAAGCCTGGACCATTGGGCTATAAATCTTCATGAGTCAATGAAGGACAGCAAGCGCGATTCCTTTGGCAGCAGCTCCATCACTACTGATTCCTATTATTGA 1146 0.4407 MGKASKWIRNFLLGKKDEKIKKIDAFCSEDLKCSGSLIVSPKVKRRWSFGKLTGGRITSKIAAGHKLSRSFDSGESAKLQIQALSERKTSRRRLPTPLPRTCKDKNKAATKIQAGFRSYLAKRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRARIHRIQMAEEVNLLGKQPPQHREVPQFRDLITEENKDSKDMSVEEMLEVLRSRSGPLDGYVKARERDSMTFYSKHVPVVSKRKIQYKNTQIVEPNSPENFLVMSEFNTMAMATSSTSQRHSVPHRQSLSPNYMNKTESSRAKVRSQSEPKQRPKRGMRHKGKSVESPLNGPRQNLFSNSLRFDRGSLDHWAINLHESMKDSKRDSFGSSSITTDSYY* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1054 381 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Pvu6g1054 381 Pfam Protein of unknown function (DUF4005) 282 324 IPR025064 -
Pvu6g1054 381 SMART iq_5 104 126 IPR000048 GO:0005515
Pvu6g1054 381 SMART iq_5 127 148 IPR000048 GO:0005515
Pvu6g1054 381 PANTHER IQ-DOMAIN 5-RELATED 1 368 - -
Pvu6g1054 381 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 368 - -
Pvu6g1054 381 MobiDBLite consensus disorder prediction 276 341 - -
Pvu6g1054 381 MobiDBLite consensus disorder prediction 276 304 - -
Pvu6g1054 381 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Pvu6g1054 381 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Pvu6g1054 381 Gene3D - 103 156 - -
Pvu6g1054 381 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1054 Pvu-Chr6 21782382 21784569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1054 1 350 IQD Protein Family AT4G14750 31.844 9.53e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1054 - - var:108318790 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1054 6 21782382 21784569 Pvu6g1054 6 21782382 21784569 ECH