Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1046 ATGAATGAACTTCAAACAGATTCTTCTGCCTCTTCGGAGTTCGTCGAAGTTGATCCAACTGGCAGATACGGCAGATACAATGAAATCCTTGGCAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAAGTCAAATTGTATGATTTTCTGCAGAGCCCTGAAGATCTTGAAAGGCTTTACTGTGAAATTCATCTTCTCAAGACGCTGAAGCACAGAAACATAATGAAGTTTTACACGTCTTGGGTCGACACTGCTAATAGGAATATCAACTTTGTGACTGAAATGTTCACTTCTGGCACCCTTAGGCAGTATAGACAAAAGCACAAAAGAGTTAACATTAGGGCAGTGAAGCACTGGTGTAGACAGATCCTGAGAGGGCTTCACTATCTTCATAGCCATGATCCACCTGTGATCCATAGAGATCTAAAATGTGATAATATTTTTATCAATGGGAACCAAGGGGAAGTTAAAATTGGGGATCTTGGGTTGGCAGCAATTCTCCGCAAGTCTCATGCTGCTCATTGTGTAGGAACACCCGAGTTCATGGCACCAGAAGTTTATGAAGAGTCCTATAACGAATTAGTTGACATATATTCCTTTGGAATGTGTGTGTTAGAAATGGTCACATTTGAATATCCTTATAGTGAATGTAGTCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAGAAACCGGAAGCCTTGTATAAAGTAAAGGACCCAGAAGTGCGACAATTTGTTGAGAAATGCGTGGCAACGGTGTCTCTAAGGCTCTCTGCAAGGGAGCTTCTAGATGATCCTTTTCTTCAGATTGATGATTACGAGTATGATTTGGGGTCTGTGGAGAGTGGAGCATTCGATGGCTTGGGTCCTCTTATCCATCAACCATTTCTTAATCTTCACCGGAGCTATAGTAACATGAGTACTGAATACTCAAATTGCTTTGAATATGAAGGAGACTGGATTTCTCATCCAGCTGAGATTGAACCAAATGGAATTGAGCTTTTCAAGTGCCATGATGATGAAGCCTGCGAAGATGTTGGCATAAGCATCAAAGGAAAGAAGAAGGATGATGGTGGAATTTTTTTGAGACTAAGAATTGCAGACAAAGAAGGACATATTCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCATTAAGTGTAGCAACTGAAATGGTAGCAGAACTCGACATTACTGATCAAGATGTTACCAGCATAGCTGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAAGCCAGGACCAGGAATTGAAGAAACTAACCATTTTGTAAATAATTTTTTTTGTCACAATTGTGTGTCCAATGATACTTCCGGTGGCAATGTTATGGATTTTCATTCACATAATCAAGTTGGAAAGAACTCGCAGCTTCCTCAATGCTGTAGGCATGGATGTACTTCAATGCATGGACGATTCGAGGAGGTAACCTACCCATCTGAGTATGACAATCACGTTAGAGGAGACACACCTATCGAATCAAACCAACCGGACTGTCAGCAGTATCAGGAGCTATGGAATCATCAAGAAAGTTGTGAACTGAGTTCAGTAGAGTCTGATCAAAGCCTTTCCAATGAGCAATATCAACAATTAGATAAATCAGTATTAGCAGAAGACAAAGGAAATGGTGTTTTGGAAAACAAGTTTGCACATGATCCAGGAAACCCCCCTAGAAGTTTATCTGGGAATTATTTGTCTACTATCAGTTTATGTCTTGGCTCCGGGAGTGAATATGAGAACGAGGCTCAACAAGAATTGAGATGGCTCAAAGCAAAACACCAAATGGAGTCAAGAGATCTTAGGGATAAAATGTTTGGTGTAGTAGCTAAATCTTCACATTCTAGTAACAAAGAGCACAAAACAGAACAAGGCATTATTCTACCATTGACAGAAACAGTAAATGGAGTGAAAAATGGGATTCACTTGAAACCCTTGTGTAATTTCTGGGATTATGATTCCAGTTGCCATTCTGAAGTCCAAAAGAGCCACTCCAATTTGGACATCCGAATGCCCCAAAATTATGAGGTGACATTTTCTCACAAAGAAGGTATGGTTGCTGCAAAGAGTTTCTTCACAGGGTCGCTTCGAGACACTCCATACAGAACAGTTTCCCTTCCCGTTGATGCTGTGGATATATAA 2211 0.4034 MNELQTDSSASSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCRQILRGLHYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVISGKKPEALYKVKDPEVRQFVEKCVATVSLRLSARELLDDPFLQIDDYEYDLGSVESGAFDGLGPLIHQPFLNLHRSYSNMSTEYSNCFEYEGDWISHPAEIEPNGIELFKCHDDEACEDVGISIKGKKKDDGGIFLRLRIADKEGHIRNIYFPFDIEMDTALSVATEMVAELDITDQDVTSIADMIDGEIASLVPEWKPGPGIEETNHFVNNFFCHNCVSNDTSGGNVMDFHSHNQVGKNSQLPQCCRHGCTSMHGRFEEVTYPSEYDNHVRGDTPIESNQPDCQQYQELWNHQESCELSSVESDQSLSNEQYQQLDKSVLAEDKGNGVLENKFAHDPGNPPRSLSGNYLSTISLCLGSGSEYENEAQQELRWLKAKHQMESRDLRDKMFGVVAKSSHSSNKEHKTEQGIILPLTETVNGVKNGIHLKPLCNFWDYDSSCHSEVQKSHSNLDIRMPQNYEVTFSHKEGMVAAKSFFTGSLRDTPYRTVSLPVDAVDI* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1046 736 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1046 736 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 723 - -
Pvu6g1046 736 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 723 - -
Pvu6g1046 736 CDD STKc_WNK 22 281 - -
Pvu6g1046 736 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Pvu6g1046 736 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Pvu6g1046 736 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1046 736 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1046 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pvu6g1046 736 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
Pvu6g1046 736 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Pvu6g1046 736 Gene3D - 371 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1046 Pvu-Chr6 21719577 21722930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1046 1 500 MAP Kinase Kinase Kinase AT3G22420 56.261 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu6g1046 Pkinase 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1046 K08867 - gmx:100790554 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1046 6 21719577 21722930 Pvu6g1046 6 21719577 21722930 ECH
Pvu6g1046 6 21719577 21722930 Pvu7g1911 7 42221318 42225025 PCT