Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1044 ATGGCGGACAAGGCTGTTACAATCAGAACCCGCAAGTTCATGACAAACAGGCTCCTCTCCAGGAAGCAGTTTGTTGTTGATGTACTTCATCCAGGGAGGGCAAATGTTTCCAAGGCTGAACTCAAGGAGAAACTTGCTAGAATGTACGAAGTCAAAGACCCTAACACTGTATTCGTCTTCAAATTCCGAACACATTTTGGTGGTGGAAAATCTACTGGTTTTGGTTTGATTTATGATTCAGTCGACAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGGAATGGTCTTGACACTAAGATAGAAAAGTCAAGGAAACAACTGAAGGAGAGGAAAAACAGAGCAAAGAAGATTCGAGGAGTAAAGAAGACAAAGGCTTCTGATGCTGCCAAGGCTGGAAAGAAGAAATAG 414 0.43 MADKAVTIRTRKFMTNRLLSRKQFVVDVLHPGRANVSKAELKEKLARMYEVKDPNTVFVFKFRTHFGGGKSTGFGLIYDSVDNAKKYEPKYRLIRNGLDTKIEKSRKQLKERKNRAKKIRGVKKTKASDAAKAGKKK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1044 137 PANTHER 40S RIBOSOMAL PROTEIN S24 1 137 - -
Pvu6g1044 137 MobiDBLite consensus disorder prediction 104 137 - -
Pvu6g1044 137 PANTHER 40S RIBOSOMAL PROTEIN S24 1 137 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pvu6g1044 137 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Pvu6g1044 137 Gene3D - 1 132 - -
Pvu6g1044 137 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pvu6g1044 137 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pvu6g1044 137 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1044 Pvu-Chr6 21706940 21708923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1044 1 132 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.879 4.55e-85 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1044 K02974 - gmx:100802918 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1044 6 21706940 21708923 Pvu6g1044 6 21706940 21708923 ECH
Pvu6g1044 6 21706940 21708923 Pvu7g1910 7 42197965 42199764 PCT