Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1035 ATGGCCTCATCTTTATCATCATCTTCTTCTTCTTCTCTAAAGTTTACAGTGCGAAGGTGCGAACCCCAGCTGGTGGCTCCTGCTATCCCCACTCCTCATGAACTCAAGCTACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTCCACAGTCCAGCAATACAAATTTATGGAAAGCAAGCATCAATGGCAGAGAAAGATCCAGTTGAAGTGATTCGGAAAGCACTGTCGCAAACACTTGTCTTCTATTACCCACTAGCGGGTAGGGTTAGGGAGGGACCTCACCGGAAATTAATGGTGGAATGCACTGGAGAAGGTGCCATGTTCATTGAGGCTGATGCTGACGTCACACTCCATGAATTTGGTGATTCTCTCCAACCTCCATTCCCATGCTTCCATGAACTGCTATACCATGTTCCTGGCTCACAACAAATTACCAACACTCCCCTTCTACTCGTACAGGTGACACGTCTTAAGTGTGGTGGGTTCATTTTGGCCTTCTCCATTAACCACACCATGTGTGATGGAACTGGTATTTCACAGTTCATGAACACATGGGCTAAAATGGCTCGTGGTTCAACCAAACCTTCCATTCCACCTGTGTGGTGTAGGGAACTCCTGATGGCAAGACATCCACCTCGTATTACATGCAACCATCGCGAATACGAACATGTCCCAGACACCATCACATCAACCGAAAACATGGTTCAACGATCGTTCTTCTTTGGACCTTCCCAAATAGCTGCTATTCGTCTCTTGGTTCCAACCCACCTTCAACACTGCACCACGTTTGACATCATCACAGCATGCTTCTGGCGTTGTCGTACAAAAGCATTGCAGATAGAGGCAGATAAGGAGGTTCGAATGATCGTGATAGTGAATGGTCGTGCAAGATTCAATCCTCCTTTACCTGTTGGTTACTATGGAAATGCTATTGCATTCCCTGCAGCAGTTACCACTGCAGGGAAGCTTTGTGAAAATCCATTTGGGTATGCAGTGGAGTTAATAAAGAAAGTGAAAGGTGTGGTGACAGAAGAGTACATGCATTCAGTGGCAGATCTGATGGTGATTAAGGACCGATGCATGTTTACAACCGTAAGGTCTTGTCTTATTTCGGATTTGACACGTGGGAGGTTTAGAGAAGTGAATTTTGGATGGGGTGAGGCTGTGTACGGTGGAGTGGCCCAAGCTGGGATTGGAAGCTTTCTTGGAGGAACCTGTCAAATGTTGCATAAGAATGCAAAAGGAGAAGAAGGCATAGTCTTACCAATTTGGTTGCCTGCTAAAGCTATGAATAGATTTGCAAAAGAGTTGGAAAACATGTTTGGGAATCAAAACCATACTACCATAAGGAGTCCTACTTTTATCATGGCTACCTTATAG 1383 0.4526 MASSLSSSSSSSLKFTVRRCEPQLVAPAIPTPHELKLLSDIDDQEALRFHSPAIQIYGKQASMAEKDPVEVIRKALSQTLVFYYPLAGRVREGPHRKLMVECTGEGAMFIEADADVTLHEFGDSLQPPFPCFHELLYHVPGSQQITNTPLLLVQVTRLKCGGFILAFSINHTMCDGTGISQFMNTWAKMARGSTKPSIPPVWCRELLMARHPPRITCNHREYEHVPDTITSTENMVQRSFFFGPSQIAAIRLLVPTHLQHCTTFDIITACFWRCRTKALQIEADKEVRMIVIVNGRARFNPPLPVGYYGNAIAFPAAVTTAGKLCENPFGYAVELIKKVKGVVTEEYMHSVADLMVIKDRCMFTTVRSCLISDLTRGRFREVNFGWGEAVYGGVAQAGIGSFLGGTCQMLHKNAKGEEGIVLPIWLPAKAMNRFAKELENMFGNQNHTTIRSPTFIMATL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1035 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 444 - -
Pvu6g1035 460 Gene3D - 231 442 IPR023213 -
Pvu6g1035 460 Gene3D - 11 224 IPR023213 -
Pvu6g1035 460 Pfam Transferase family 20 441 - -
Pvu6g1035 460 PANTHER ALCOHOL ACYLTRANSFERASE 15 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1035 Pvu-Chr6 21641856 21644429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1035 13 403 Monolignol Biosynthesis Gene Families AT5G48930 29.440 1.78e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1035 K19861 - gmx:100792864 661.759