Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1034 ATGGCTTCACCATCTCCCTCTCTGTCATTTACAATGCGTAAGTGTCAACCTGAGCTAGTGGCTCCTGCAATTCCCACTCCCGACGAAACTAAACTACTATCTGACATAGACGATCAAAGCTACCTTCGTTTCCATTATTCAATCATACAAATCTATCAAAATGAATCATCAATGGCGAATAAAGACCCAGTAATAGTGATTCGGCAGGCACTGGCACGAGCACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGTCGTGGCCGCAAATTGATGGTGGATTGTGGTGGAGAGGGTGTCATGTTCGTTGAGGCTGACGCTGACGTAACACTGGAACAGTTTGGTGACAATCTTCAACCTCCATTCATATACTCTAAAGCTTTTCTATGTGATGTTCCAGACTCCGAAGATATCAAAAAATTGCCCCTTCTACTCATCCAGGTGACACGACTCAAGTGTGGTGGTTTCGTGGTGTCGACGGGGTGGAACCACGTGATGGCAGACGGAGCTGGTTTGTCACAGTTCATGCATGCATGGGCTGAAATGGCTCGAGGTATGAAGACTCCTTCCATTTCACCTCTCTGGCGAAGGGAGCTCCTAATGGCAAGAGATCCACCTCGCATAACATGCAACCACCGTGAATACGACCAAATCCAAGACACCCTCTCTTCTTCCGACCACCACTTGGTTCATCGATCGTTCTTCTTCGGACCTGCTCAGATGGCCGCCCTTCGTCGCTTGCTTCCCCATCACCTCCGACAGTGCACGGCTTTCGATCTCATCACAGCATGCTTATGGCGTTGTCGCACAAAAGCACTGCAAACAGACGCAGATGAGGATGTTCGCATGATGTGCATCGTGAACGCGCGTAATAGGTTCCGTCCTCCGTTACCTATTGGTTACTACGGCAACGCTTTTGCATACCCCGCCGCAACGAGCAGCGCAGGGAAGCTCTGCGCAAGCCCATTTGCTTATGCGGTGGAGTTGATTCATAATGTGAAGGGTGTGGTGACAGATGAGTATATGCATTCTGTGGCGGATCTAATGGTGCTTAAGGGACGGTGCATGCCGACAACTGTAAGGTCCTGTTTGGTATCAGACCTGACTCGTGCTAGGTTTAGGGACGTGGATTTTGGATGGGGCAAGGCCTTGTGTGGTGCTCCAGCGAAAGGTAGTACTGGACCCTTTTATGGAGGAACACACATTGTGTCGTATAAGAATTCAAAAGGAGAAGATGGCTTGGTGTTACCAGTTTGGTTGCCTGCAAAACCTATGCAGAGGTTTCTCAAAGAGATGGATGATATGCTCAGTGGCAACCACCAAAACAACCCTAAAACAACCCCTGCTTTTATCAGGTCTAACGTTTAG 1374 0.4891 MASPSPSLSFTMRKCQPELVAPAIPTPDETKLLSDIDDQSYLRFHYSIIQIYQNESSMANKDPVIVIRQALARALVFYYPFAGRLREGRGRKLMVDCGGEGVMFVEADADVTLEQFGDNLQPPFIYSKAFLCDVPDSEDIKKLPLLLIQVTRLKCGGFVVSTGWNHVMADGAGLSQFMHAWAEMARGMKTPSISPLWRRELLMARDPPRITCNHREYDQIQDTLSSSDHHLVHRSFFFGPAQMAALRRLLPHHLRQCTAFDLITACLWRCRTKALQTDADEDVRMMCIVNARNRFRPPLPIGYYGNAFAYPAATSSAGKLCASPFAYAVELIHNVKGVVTDEYMHSVADLMVLKGRCMPTTVRSCLVSDLTRARFRDVDFGWGKALCGAPAKGSTGPFYGGTHIVSYKNSKGEDGLVLPVWLPAKPMQRFLKEMDDMLSGNHQNNPKTTPAFIRSNV* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1034 457 PANTHER ALCOHOL ACYLTRANSFERASE 10 440 - -
Pvu6g1034 457 Pfam Transferase family 16 436 - -
Pvu6g1034 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 440 - -
Pvu6g1034 457 Gene3D - 8 214 IPR023213 -
Pvu6g1034 457 Gene3D - 215 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1034 Pvu-Chr6 21633899 21635455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1034 19 432 Monolignol Biosynthesis Gene Families AT5G48930 29.535 3.17e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1034 K19861 - gmx:100792864 625.935